RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 UHRF1Q96T88 793 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 RBBP8Q99708 897 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 NPLQ9BXD5 320 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 ELOVL4Q9GZR5 314 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 FAM49AQ9H0Q0 323 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 MRPL40Q9NQ50 206 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 ZDHHC2Q9UIJ5 367 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CNOT6Q9ULM6 557 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 TMED5Q9Y3A6 229 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 A0A1W2PPW3 197 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 SOCS2O14508 198 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 BAIAP3O94812 1187 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 TNNC2P02585 160 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 MPOP05164 745 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 SPRP35270 261 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 SURF1Q15526 300 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 DLG2Q15700 870 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 ARL13AQ5H913 290 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 GPR107Q5VW38 600 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 PPP4R4Q6NUP7 873 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 NIPAL1Q6NVV3 410 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 DPH6Q7L8W6 267 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CLEC14AQ86T13 490 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 RTN4RL1Q86UN2 441 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 TTC30AQ86WT1 665 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 ZNF420Q8TAQ5 688 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 CHPT1Q8WUD6 406 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CAB39LQ9H9S4 337 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 TRNAU1APQ9NX07 287 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 UTP6Q9NYH9 597 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 VTI1BQ9UEU0 232 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 HES2Q9Y543 173 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 TCRBV3S1A0A5B6 114 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 KCNU1A8MYU2 1149 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 E7ENX8 843 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 F7P08709 466 aaPredicted RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 KRT19P08727 400 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CD247P20963 164 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 CDH3P22223 829 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 GRIA4P48058 902 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 PSMD8P48556 350 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 LIMK2P53671 638 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 PRKCQQ04759 706 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 PRKAA1Q13131 559 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 LRIT3Q3SXY7 679 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 ZNF667Q5HYK9 610 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 AARS2Q5JTZ9 985 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 ZPBP2Q6X784 338 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 GK5Q6ZS86 529 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 STRA8Q7Z7C7 330 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 TNIP2Q8NFZ5 429 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 SLC7A14Q8TBB6 771 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 PPWD1Q96BP3 646 aaKnown RBP8.64□□□□□ -1.03
HPS4-206ENST00000439453 TBCBQ99426 244 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 DOK1Q99704 481 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 NAT9Q9BTE0 207 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 EFHD1Q9BUP0 239 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 NRBP2Q9NSY0 501 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 TRPV2Q9Y5S1 764 aa8.64□□□□□ -1.03
HPS4-206ENST00000439453 A0A0A0MRY4 1105 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 OGTO15294 1046 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 AKAP10O43572 662 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 MGEA5O60502 916 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 JUNP05412 331 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 POLBP06746 335 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 GNAO1P09471 354 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 DCKP27707 260 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TRAP1Q12931 704 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 CAPSQ13938 189 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 KIZQ2M2Z5 673 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 FGD3Q5JSP0 725 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 CYP2R1Q6VVX0 501 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 ANKFN1Q8N957 763 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 COLGALT1Q8NBJ5 622 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 STON2Q8WXE9 905 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 DUS3LQ96G46 650 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 SPATA13Q96N96 652 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 GNPTGQ9UJJ9 305 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TDRD15B5MCY1 1934 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 HEATR9A2RTY3 570 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 SLCO1B7G3V0H7 640 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TIPRLO75663 272 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 ARHGEF15O94989 841 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 C2P06681 752 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 PFKMP08237 780 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 ABCG1P45844 678 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 NR2C2P49116 596 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 TMED10P49755 219 aaKnown RBP8.63□□□□□ -1.03
HPS4-206ENST00000439453 DEFB103AP81534 67 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 KCNC4Q03721 635 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 BNIP3Q12983 259 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 PMS2P3Q13401 168 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 MOGQ16653 247 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 GLRA4Q5JXX5 417 aa8.63□□□□□ -1.03
HPS4-206ENST00000439453 SPANXN3Q5MJ09 141 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms