RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 CES1P23141 567 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 CD86P42081 329 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 IHHQ14623 411 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3GQ6DHY5 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3CQ6IPX1 549 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TBC1D3Q8IZP1 549 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-203ENST00000439080 ZNF567Q8N184 647 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 SLC35B2Q8TB61 432 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 WDR24Q96S15 920 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 VAT1Q99536 393 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 FERMT1Q9BQL6 677 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 TDRD1Q9BXT4 1180 aaKnown RBP17.05■□□□□ 0.32
TARDBP-203ENST00000439080 DNPEPQ9ULA0 475 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 RAI2Q9Y5P3 530 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 ZFHX2Q9C0A1 2572 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-203ENST00000439080 ZNF292O60281 2723 aa17.05■□□□□ 0.32
TARDBP-203ENST00000439080 BCLAF3A2AJT9 711 aaKnown RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 RNGTTO60942 597 aaKnown RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 ZNF189O75820 626 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 RETP07949 1114 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 MMP2P08253 660 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 TIMP2P16035 220 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 NFKB1P19838 968 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 CD68P34810 354 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 MPLP40238 635 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 SIX1Q15475 284 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 UGP2Q16851 508 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 WDR45BQ5MNZ6 344 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 SYCP2LQ5T4T6 812 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 TTC7BQ86TV6 843 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 TRIM69Q86WT6 500 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 RGL4Q8IZJ4 473 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 IMP4Q96G21 291 aaKnown RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 PBKQ96KB5 322 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 OSBPL9Q96SU4 736 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.329e-7■■■□□ 18.3
TARDBP-203ENST00000439080 HINFPQ9BQA5 517 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 FRMD8P1Q9BZ68 369 aaPredicted RBP17.04■□□□□ 0.32
TARDBP-203ENST00000439080 SLC25A51Q9H1U9 297 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 ARRDC1-AS1Q9H2J1 176 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 GLOD4Q9HC38 313 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 PCDH12Q9NPG4 1184 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 SNX12Q9UMY4 172 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 PCDHGA5Q9Y5G8 931 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 ADAMTS9Q9P2N4 1935 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 PI4KAP42356 2102 aa17.04■□□□□ 0.32
TARDBP-203ENST00000439080 A0A1W2PQ67 120 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 A0A1W2PQU0 124 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 NEMP1O14524 444 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 AREL1O15033 823 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 LIASO43766 372 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 STK10O94804 968 aaKnown RBP17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PCDH8O95206 1070 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PGLSO95336 258 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PRKCGP05129 697 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 ITIH2P19823 946 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 CA4P22748 312 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 MAOBP27338 520 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 MAT2AP31153 395 aaKnown RBP17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PLA2G5P39877 138 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 CCR5P51681 352 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 SUOXP51687 545 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 SKOR1P84550 965 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 LONRF2Q1L5Z9 754 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PEAR1Q5VY43 1037 aaPredicted RBP17.03■□□□□ 0.32
TARDBP-203ENST00000439080 SEL1L3Q68CR1 1132 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 KIAA1161Q6NSJ0 714 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 ERAP2Q6P179 960 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 C1orf54Q8WWF1 131 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 RUBCNQ92622 972 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PIGKQ92643 395 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 MIR1-1HGQ9H1L0 117 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 RSPH14Q9UHP6 348 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 EIF2B4Q9UI10 523 aaKnown RBP17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PILRBQ9UKJ0 227 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 TRHDEQ9UKU6 1024 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 PCDH15Q96QU1 1955 aa17.03■□□□□ 0.32
TARDBP-203ENST00000439080 F5H423 210 aaPredicted RBP17.02■□□□□ 0.32
TARDBP-203ENST00000439080 LATO43561 262 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 TSPAN6O43657 245 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 GFRA3O60609 400 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 MMP12P39900 470 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 DPP6P42658 865 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 POLR2LP62875 67 aaKnown RBP17.02■□□□□ 0.32
TARDBP-203ENST00000439080 ELP6Q0PNE2 266 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 OASLQ15646 514 aaKnown RBP17.02■□□□□ 0.32
TARDBP-203ENST00000439080 CCDC6Q16204 474 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 GON4LQ3T8J9 2241 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 NEK5Q6P3R8 708 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.32
TARDBP-203ENST00000439080 HORMAD1Q86X24 394 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 SYT12Q8IV01 421 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 RASGEF1CQ8N431 466 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.32
TARDBP-203ENST00000439080 SPATA22Q8NHS9 363 aa17.02■□□□□ 0.32
TARDBP-203ENST00000439080 COG1Q8WTW3 980 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms