RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CLCN5P51795 746 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 RARSP54136 660 aaKnown RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 CAPSQ13938 189 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 ARHGEF6Q15052 776 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 RNPS1Q15287 305 aaKnown RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 PRAMEF19Q5SWL8 479 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 CDC73Q6P1J9 531 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 PDXDC1Q6P996 788 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 KLHL24Q6TFL4 600 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 C4orf50Q6ZRC1 276 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 ZNF367Q7RTV3 350 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 CTU1Q7Z7A3 348 aaKnown RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 CPLX4Q7Z7G2 160 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 SFTPA2Q8IWL1 248 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 ZCCHC9Q8N567 271 aaKnown RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 GJC3Q8NFK1 279 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 SCARB1Q8WTV0 552 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 SNAPC3Q92966 411 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 SMARCE1Q969G3 411 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 FAM149B1Q96BN6 582 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 BBS4Q96RK4 519 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 MXRA8Q9BRK3 442 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 NPFFR1Q9GZQ6 430 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 DIAPH3Q9NSV4 1193 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 TERF2IPQ9NYB0 399 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 AASSQ9UDR5 926 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 HAO1Q9UJM8 370 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 LAS1LQ9Y4W2 734 aaKnown RBP3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 RAI2Q9Y5P3 530 aa3.94□□□□□ -1.78
LSM1P1-201ENST00000438629 KDM4EB2RXH2 506 aaPredicted RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 LIASO43766 372 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 NDUFB4O95168 129 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 DDX58O95786 925 aaKnown RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 CLEC3BP05452 202 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 HSP90AA1P07900 732 aaKnown RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 SPARCP09486 303 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 CBSLP0DN79 551 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 HOXB2P14652 356 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 GPTP24298 496 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 CHATP28329 748 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 CBSP35520 551 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 BSGP35613 385 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 HARS2P49590 506 aaKnown RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 NAP1L1P55209 391 aaKnown RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 CLDN2P57739 230 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 SETQ01105 290 aaPredicted RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 GOLGA8DPQ0D2H9 430 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 NEDD9Q14511 834 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 TSTQ16762 297 aaKnown RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 TCTN1Q2MV58 587 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 FNBP1LQ5T0N5 605 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 MB21D2Q8IYB1 491 aaPredicted RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 CADM4Q8NFZ8 388 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 FBXL8Q96CD0 374 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 ZNF570Q96NI8 536 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 MAP7D2Q96T17 732 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 LBHD1Q9BQE6 289 aaPredicted RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 MSTO1Q9BUK6 570 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 HEMGNQ9BXL5 484 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 BPIFA1Q9NP55 256 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 ASAH2Q9NR71 780 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 ORC3Q9UBD5 711 aaPredicted RBP3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 FZD10Q9ULW2 581 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 SCINQ9Y6U3 715 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 A3GALT2U3KPV4 340 aa3.93□□□□□ -1.78
LSM1P1-201ENST00000438629 RUSC2Q8N2Y8 1516 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A0U1RQF3 1178 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A0U1RQG5 324 aaPredicted RBP3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A1B0GVM2 712 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 A0A1W2PRG0 241 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 HSPB2A8KAH6 182 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 BECN2A8MW95 431 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 TNFRSF13BO14836 293 aaPredicted RBP3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 SEC14L5O43304 696 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 LDB2O43679 373 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 TOMM40O96008 361 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 LCATP04180 440 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 MMP2P08253 660 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 HOXC6P09630 235 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 CDAP32320 146 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 MLH1P40692 756 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 POLGP54098 1239 aaPredicted RBP3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 GEMIN4P57678 1058 aaKnown RBP3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 DCTN2Q13561 401 aaKnown RBP3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 HSPB2Q16082 182 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 SOWAHAQ2M3V2 549 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 DPCR1Q3MIW9 517 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 ESCO2Q56NI9 601 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 HAUS3Q68CZ6 603 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 TRIB2Q92519 343 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 SLITRK1Q96PX8 696 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 NUF2Q9BZD4 464 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 DCLK3Q9C098 648 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 PLEKHA4Q9H4M7 779 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 MAGEE1Q9HCI5 957 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 CYSLTR2Q9NS75 346 aa3.92□□□□□ -1.78
LSM1P1-201ENST00000438629 EHD2Q9NZN4 543 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms