RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ST20-MTHFSA0A0A6YYL1 179 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 CENPVL1A0A0U1RR11 272 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 TRBC2A0A5B9 178 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MBD3L4A6NDZ8 208 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MBD3L3A6NE82 208 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZSCAN5BA6NJL1 495 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SAC3D1A6NKF1 404 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRR5-ARHGAP8B1AHC4 643 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PEX12O00623 359 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 IFIT3O14879 490 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MAPK13O15264 365 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ERLIN1O75477 346 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 STC2O76061 302 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 POP4O95707 220 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 EIF2S1P05198 315 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 FYNP06241 537 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MMP2P08253 660 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 VSIG10L2P0DP72 767 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KRT5P13647 590 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 CASTP20810 708 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SERPINA4P29622 427 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRDX5P30044 214 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MCM5P33992 734 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PBX3P40426 434 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MDH1P40925 334 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 WNT5AP41221 380 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRKCIP41743 596 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PTGER3P43115 390 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC6A9P48067 706 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 CLK3P49761 638 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 LIG4P49917 911 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KHKP50053 298 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MRPL12P52815 198 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 AP3M2P53677 418 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 NME5P56597 212 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KRTAP10-9P60411 292 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 RPL7AP62424 266 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRAMEP78395 509 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC6A3Q01959 620 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 EXOSC9Q06265 439 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 CCDC173Q0VFZ6 552 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 IKQ13123 557 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 CTBP1Q13363 440 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PLD1Q13393 1074 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ALCAMQ13740 583 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SNTB1Q13884 538 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 IDI1Q13907 227 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 GALNT3Q14435 633 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 RPS6KA2Q15349 733 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PFKFB3Q16875 520 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 TWISTNBQ3B726 338 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 EMC10Q5UCC4 262 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 LIPMQ5VYY2 423 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 PAPD7Q5XG87 772 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 FCRLBQ6BAA4 426 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KIAA1841Q6NSI8 718 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 MFSD7Q6UXD7 560 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 Q6YL49 198 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 RBPMS2Q6ZRY4 209 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KANSL1Q7Z3B3 1105 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ARMC9Q7Z3E5 817 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 TAF8Q7Z7C8 310 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 RFX6Q8HWS3 928 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ELMOD2Q8IZ81 293 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZCCHC7Q8N3Z6 543 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC15A4Q8N697 577 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KDM1BQ8NB78 822 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 XXYLT1Q8NBI6 393 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 OR8K3Q8NH51 312 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 LILRB4Q8NHJ6 448 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 IP6K1Q92551 441 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 HOXB13Q92826 284 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ELP4Q96EB1 424 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 HS6ST2Q96MM7 605 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 DGAT2Q96PD7 388 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 GAL3ST4Q96RP7 486 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KCNK16Q96T55 309 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 GAL3ST1Q99999 423 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 WDR11Q9BZH6 1224 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 TRIM31Q9BZY9 425 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 R3HDMLQ9H3Y0 253 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC32A1Q9H598 525 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF768Q9H5H4 540 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 XKR8Q9H6D3 395 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 GORASP2Q9H8Y8 452 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 HEYLQ9NQ87 328 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SPATS2LQ9NUQ6 558 aaKnown RBP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 TMOD3Q9NYL9 352 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 SPASTQ9UBP0 616 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 OSGIN1Q9UJX0 560 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 ADGRF5Q8IZF2 1346 aa3.71□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM237BA0A1B0GVD1 139 aa3.71□□□□□ -1.82
HMGB1P12-201ENST00000438594 UBA6A0AVT1 1052 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P12-201ENST00000438594 DENND3A2RUS2 1198 aa3.71□□□□□ -1.82
HMGB1P12-201ENST00000438594 GRXCR1A8MXD5 290 aa3.71□□□□□ -1.82
HMGB1P12-201ENST00000438594 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.82
HMGB1P12-201ENST00000438594 A8MZ25 164 aa3.71□□□□□ -1.82
HMGB1P12-201ENST00000438594 BTBD18B2RXH4 712 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms