RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 GRIA4P48058 902 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 CRYBB1P53674 252 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 PRKG2Q13237 762 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 TCEAL5Q5H9L2 206 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 PAPD7Q5XG87 772 aaKnown RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 DCLRE1AQ6PJP8 1040 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 ZDHHC13Q8IUH4 622 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 VPS35Q96QK1 796 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 MCMBPQ9BTE3 642 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 SUCOQ9UBS9 1254 aaKnown RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 PSMD13Q9UNM6 376 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 KLRG2A4D1S0 409 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 FTH1P02794 183 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 SHBGP04278 402 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 CCNYL3P0C7X3 344 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 CYP4B1P13584 511 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 ACADSP16219 412 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 SYN1P17600 705 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 PTPN4P29074 926 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 CDC25CP30307 473 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 RPL7AP62424 266 aaKnown RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 CBX2Q14781 532 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 VANGL1Q8TAA9 524 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 STAG3L4Q8TBR4 150 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 CENPIQ92674 756 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 SLC35C1Q96A29 364 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 NPEPPSL1A6NEC2 478 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 H3BMM5 538 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 APOC4-APOC2K7ER74 178 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 TCEA3O75764 348 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 APOC2P02655 101 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 GRIA3P42263 894 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 MADCAM1Q13477 382 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 WDR93Q6P2C0 686 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 TMPRSS11BQ86T26 416 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 ATAD1Q8NBU5 361 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 HJURPQ8NCD3 748 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-206ENST00000438092 FANCEQ9HB96 536 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 SLC27A6Q9Y2P4 619 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 SESN1Q9Y6P5 492 aa10.4□□□□□ -0.74
SHPRH-206ENST00000438092 A0A0A0MRY4 1105 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 ENPP3O14638 875 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 SNPHO15079 494 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 APODP05090 189 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 SPIBQ01892 262 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 EEF1DP3Q658K8 133 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 AFTPHQ6ULP2 937 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 ZBTB46Q86UZ6 589 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 SPATA13Q96N96 652 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 AARSD1Q9BTE6 412 aaKnown RBP10.4□□□□□ -0.75
SHPRH-206ENST00000438092 PRDM12Q9H4Q4 367 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 CLEC4AQ9UMR7 237 aa10.4□□□□□ -0.75
SHPRH-206ENST00000438092 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 CENPXA8MT69 81 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 VPS4BO75351 444 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 MATN4O95460 622 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 BCL10O95999 233 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 IL6P05231 212 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 TAF10Q12962 218 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FRG1Q14331 258 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 RRP1BQ14684 758 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 KPNB1Q14974 876 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 UBXN2BQ14CS0 331 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FAM187BQ17R55 369 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FAM220AQ7Z4H9 259 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 TMC3Q7Z5M5 1100 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 VSIG10LQ86VR7 867 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 ETNPPLQ8TBG4 499 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 SMG7Q92540 1137 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 RORBQ92753 470 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FAIM2Q9BWQ8 316 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 IDI2Q9BXS1 227 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 TMEM134Q9H6X4 195 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FAM237BA0A1B0GVD1 139 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 PAGE1O75459 146 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 TOP3BO95985 862 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 RPL17P18621 184 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 MRPS35P82673 323 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 UBAP2LQ14157 1087 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 HPS6Q86YV9 775 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 TTPALQ9BTX7 342 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 CNOT6Q9ULM6 557 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 MMP3P08254 477 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 ATP4AP20648 1035 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 AQP1P29972 269 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 CORO1AP31146 461 aaKnown RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 MTA1Q13330 715 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FNBP1LQ5T0N5 605 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 PRMT9Q6P2P2 845 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 RHBDF2Q6PJF5 856 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 QRFPRQ96P65 431 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 MTMR9Q96QG7 549 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 CDADC1Q9BWV3 514 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 EVLQ9UI08 416 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-206ENST00000438092 SNX10Q9Y5X0 201 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 FGBP02675 491 aa10.39□□□□□ -0.75
SHPRH-206ENST00000438092 ITGA3P26006 1051 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms