RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
TMEM116-202ENST00000437003 GNL1P36915 607 aaPredicted RBP12.48□□□□□ -0.41
TMEM116-202ENST00000437003 GRIA3P42263 894 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 ACADVLP49748 655 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 C9orf57Q5W0N0 161 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
TMEM116-202ENST00000437003 SLC15A4Q8N697 577 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 ANKRD52Q8NB46 1076 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 OR52K1Q8NGK4 314 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 CANT1Q8WVQ1 401 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 TANKQ92844 425 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 FBXL20Q96IG2 436 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 OSMRQ99650 979 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 DRC3Q9H069 523 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 PRDM12Q9H4Q4 367 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
TMEM116-202ENST00000437003 C1orf232A0A0U1RR37 186 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 HEATR9A2RTY3 570 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF487B1APH4 448 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 RECQL4O94761 1208 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 LIMK2P53671 638 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 BCAT1P54687 386 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 MAP7D1Q3KQU3 841 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 FBXO47Q5MNV8 452 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 LDLRAP1Q5SW96 308 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ARHGAP17Q68EM7 881 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 NOTUMQ6P988 496 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 CNTD1Q8N815 330 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 DNAAF3Q8N9W5 541 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 CENPIQ92674 756 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 KLHL8Q9P2G9 620 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 FADS3Q9Y5Q0 445 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 H0YJX3 145 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SPTLC1O15269 473 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 MT-CO1P00395 513 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 MMP3P08254 477 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SMPD1P17405 629 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 NDUFV1P49821 464 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 NSUN2Q08J23 767 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 IFRD2Q12894 506 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 PRKAA1Q13131 559 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 LIPMQ5VYY2 423 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ZC3H7AQ8IWR0 971 aaKnown RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF567Q8N184 647 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 RNF139Q8WU17 664 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 MFSD3Q96ES6 412 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SGF29Q96ES7 293 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 OMDQ99983 421 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 C11orf84Q9BUA3 381 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ADI1Q9BV57 179 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SNX25Q9H3E2 840 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SOX17Q9H6I2 414 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SUCOQ9UBS9 1254 aaKnown RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 BPTFQ12830 3046 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 RNF103-CHMP3A0A140T963 221 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 M0QYT0 321 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 TKTP29401 623 aaKnown RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SLC7A1P30825 629 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 RFTN1Q14699 578 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-202ENST00000437003 AGKQ53H12 422 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 ANKRD26P1Q6NSI1 321 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 GALNT18Q6P9A2 607 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 SLC10A4Q96EP9 437 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 EFHD1Q9BUP0 239 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 KATNBL1Q9H079 304 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 GTSE1Q9NYZ3 720 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
TMEM116-202ENST00000437003 NUP205Q92621 2012 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 TOMM70O94826 608 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 MAP4P27816 1152 aaKnown RBP12.46□□□□□ -0.41
TMEM116-202ENST00000437003 SPIDRQ14159 915 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF460Q14592 562 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 HERC3Q15034 1050 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 RGS21Q2M5E4 152 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 LSMEM2Q8N112 164 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 KCTD4Q8WVF5 259 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 PBXIP1Q96AQ6 731 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 IL1RL2Q9HB29 575 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 UBP1Q9NZI7 540 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 SPATA7Q9P0W8 599 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 IPO11Q9UI26 975 aaKnown RBP12.46□□□□□ -0.41
TMEM116-202ENST00000437003 FZD10Q9ULW2 581 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 USP3Q9Y6I4 520 aa12.46□□□□□ -0.41
TMEM116-202ENST00000437003 CFAP99D6REC4 459 aa12.46□□□□□ -0.42
TMEM116-202ENST00000437003 PDHXO00330 501 aa12.46□□□□□ -0.42
TMEM116-202ENST00000437003 GPR32O75388 356 aa12.46□□□□□ -0.42
TMEM116-202ENST00000437003 KCNH1O95259 989 aa12.46□□□□□ -0.42
TMEM116-202ENST00000437003 INHBBP09529 407 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms