RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 DRGXA6NNA5 263 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 ZMPSTE24O75844 475 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 IPO13O94829 963 aaKnown RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 ITGB1P05556 798 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 HSPA1AP0DMV8 641 aaKnown RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 HSPA1BP0DMV9 641 aaKnown RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 RAG1P15918 1043 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 CD86P42081 329 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 MAPKAPK2P49137 400 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 YBEYP58557 167 aaPredicted RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 DSC1Q08554 894 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 STX5Q13190 355 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 CRHR2Q13324 411 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 BTG3Q14201 252 aaPredicted RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 CSHL1Q14406 222 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 ZNF460Q14592 562 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 PDCD2Q16342 344 aaPredicted RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 PARP15Q460N3 678 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 MS4A13Q5J8X5 152 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 HECTD2Q5U5R9 776 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 CNSTQ6PJW8 725 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 TADA1Q96BN2 335 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 CCDC124Q96CT7 223 aaKnown RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 RCN3Q96D15 328 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 HMCESQ96FZ2 354 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 ZNF419Q96HQ0 510 aaPredicted RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 FAM193BQ96PV7 902 aaPredicted RBP10.5□□□□□ -0.73
CD44-210ENST00000434472 BTBD9Q96Q07 612 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 RETREG1Q9H6L5 497 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 GTSE1Q9NYZ3 720 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 RIMKLBQ9ULI2 386 aa10.5□□□□□ -0.73
CD44-210ENST00000434472 NUP205Q92621 2012 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 FAM92AA1XBS5 289 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 MROH6A6NGR9 719 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 EIF4E1BA6NMX2 242 aaKnown RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 SDHDO14521 159 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 LYNP07948 512 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 OR4Q2P0C623 313 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 COL6A1P12109 1028 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 UQCRBP14927 111 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 ME2P23368 584 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 YWHAQP27348 245 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 CCR10P46092 362 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 OR1G1P47890 313 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 CLCN2P51788 898 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 KPNA1P52294 538 aaPredicted RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 PRAMEP78395 509 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 FAM189BP81408 668 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 MED21Q13503 144 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 PEX6Q13608 980 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 SQLEQ14534 574 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 TRIP10Q15642 601 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 TCHHL1Q5QJ38 904 aaPredicted RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 OR52E8Q6IFG1 317 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 CCSAPQ6IQ19 270 aaPredicted RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 SLC24A5Q71RS6 500 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 COLGALT2Q8IYK4 626 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 FEM1CQ96JP0 617 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 ASB2Q96Q27 587 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 CDRT15Q96T59 188 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 ATXN3LQ9H3M9 355 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 WDR41Q9HAD4 459 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 POPDC3Q9HBV1 291 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 TLR8Q9NR97 1041 aaKnown RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 GMIPQ9P107 970 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 NUDT5Q9UKK9 219 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 ADAMTS6Q9UKP5 1117 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 G3BP2Q9UN86 482 aaKnown RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 VWA7Q9Y334 891 aa10.49□□□□□ -0.73
CD44-210ENST00000434472 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
CD44-210ENST00000434472 LOC285095A0A1B0GVY8 99 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 A8MT66 165 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 H3BNX3 289 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 J3KR12 359 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 TRIM38O00635 465 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 CA12O43570 354 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 SMIM24O75264 130 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 FGF1P05230 155 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 MMP2P08253 660 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 HLA-DPA1P20036 260 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 IMPDH1P20839 514 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 CTGFP29279 349 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 PBX3P40426 434 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 PGFP49763 221 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 ATP4BP51164 291 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 INHBCP55103 352 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 SULT2A1Q06520 285 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 RING1Q06587 406 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
CD44-210ENST00000434472 SLC10A7Q0GE19 358 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 EFEMP1Q12805 493 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 SMARCB1Q12824 385 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 FLOT2Q14254 428 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 DDR2Q16832 855 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 ZNF423Q2M1K9 1284 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 PIGGQ5H8A4 983 aa10.48□□□□□ -0.73
CD44-210ENST00000434472 RBM20Q5T481 1227 aaKnown RBP10.48□□□□□ -0.73
CD44-210ENST00000434472 OGFRL1Q5TC84 451 aaPredicted RBP10.48□□□□□ -0.73
CD44-210ENST00000434472 CHSY3Q70JA7 882 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms