RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 HLA-DPA1P20036 260 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 MAGEA9P43362 315 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 PSMD8P48556 350 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 OLIG2Q13516 323 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 HLTFQ14527 1009 aaKnown RBP eCLIP23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 TRADDQ15628 312 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 CRY1Q16526 586 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 ZNF805Q5CZA5 627 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 FAM46CQ5VWP2 391 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 CWF19L1Q69YN2 538 aaKnown RBP23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 SYT13Q7L8C5 426 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 KDELC2Q7Z4H8 507 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 MMAAQ8IVH4 418 aaKnown RBP23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 ART4Q93070 314 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 ECHDC3Q96DC8 303 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 PPP1R16AQ96I34 528 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 TRIB3Q96RU7 358 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 APOL2Q9BQE5 337 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 IER2Q9BTL4 223 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 ADGRE3Q9BY15 652 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 FRMD8Q9BZ67 464 aaPredicted RBP23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 EPC1Q9H2F5 836 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 PCDHB9Q9Y5E1 797 aa23.4■■□□□ 1.34
SMARCAL1-208ENST00000434435 GOLGA8MH3BSY2 632 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 KPNA3O00505 521 aaPredicted RBP23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 FZD6O60353 706 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 ADH1BP00325 375 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 FGF1P05230 155 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 COPAP53621 1224 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 EPHB1P54762 984 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 PLTPP55058 493 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 RPL26P61254 145 aaKnown RBP23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 SATB1Q01826 763 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 GAS6Q14393 721 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 SLC1A5Q15758 541 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 BRAT1Q6PJG6 821 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 TMEM92Q6UXU6 159 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 RANBP10Q6VN20 620 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 GPR161Q8N6U8 529 aaKnown RBP23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 LPCAT1Q8NF37 534 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 IFT81Q8WYA0 676 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 XAB2Q9HCS7 855 aaKnown RBP23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 CD248Q9HCU0 757 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 POLMQ9NP87 494 aaPredicted RBP23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 DYRK4Q9NR20 520 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 DKK3Q9UBP4 350 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 SARDHQ9UL12 918 aa23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 RPL26L1Q9UNX3 145 aaKnown RBP23.39■■□□□ 1.33
SMARCAL1-208ENST00000434435 TSPAN11A1L157 253 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 TMEM221A6NGB7 291 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 M0R296 226 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 AP3B1O00203 1094 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 TP73O15350 636 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 PDHA1P08559 390 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 ITGB7P26010 798 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 DGKEP52429 567 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 GALNT3Q14435 633 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 CST6Q15828 149 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 ZDHHC24Q6UX98 284 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 SLC25A41Q8N5S1 370 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 DNAAF3Q8N9W5 541 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 MYRIPQ8NFW9 859 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 OR52K1Q8NGK4 314 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 FBXO25Q8TCJ0 367 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 HCAR2Q8TDS4 363 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 RMDN1Q96DB5 314 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 CASS4Q9NQ75 786 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 BDP1A6H8Y1 2624 aa23.38■■□□□ 1.33
SMARCAL1-208ENST00000434435 TCRBV21S2A2A0A5A6 115 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 PDGFBP01127 241 aaPredicted RBP23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 PRLP01236 227 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 DCNP07585 359 aaKnown RBP23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 ATXN1LP0C7T5 689 aaKnown RBP23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 MLNP12872 115 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 TNFRSF8P28908 595 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 CHRNA4P43681 627 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 GRIA4P48058 902 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 CARSP49589 748 aaKnown RBP23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 RPS14P62263 151 aaKnown RBP23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 CDH17Q12864 832 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 POM121L1PQ3SYA9 428 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 SIRPB2Q5JXA9 342 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 LRRC8BQ6P9F7 803 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 ZNF534Q76KX8 674 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 CACUL1Q86Y37 369 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 NDUFAF2Q8N183 169 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 SPEM1Q8N4L4 309 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 SPOCK2Q92563 424 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 SERPINB12Q96P63 405 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 ARNT2Q9HBZ2 717 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 ZDHHC18Q9NUE0 388 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 MTRF1LQ9UGC7 380 aaKnown RBP23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 PHTF1Q9UMS5 762 aa23.37■■□□□ 1.33
SMARCAL1-208ENST00000434435 SCN8AQ9UQD0 1980 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 C5AR1P21730 350 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 MCM3P25205 808 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 GRIA1P42261 906 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 ARL4CP56559 192 aa23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 POLR2LP62875 67 aaKnown RBP23.36■■□□□ 1.33
SMARCAL1-208ENST00000434435 ELF2Q15723 593 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms