RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 POMKQ9H5K3 350 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 FETUBQ9UGM5 382 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 PCDHB7Q9Y5E2 793 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 USP34Q70CQ2 3546 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 VCANP13611 3396 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 PPP6CO00743 305 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 COPAP53621 1224 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 DLG1Q12959 904 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 MAP7Q14244 749 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 IYDQ6PHW0 289 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SLC24A5Q71RS6 500 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 ZC3HC1Q86WB0 502 aaKnown RBP15.7■□□□□ 0.1
SCARF1-203ENST00000434376 OR6Y1Q8NGX8 325 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 HEXDCQ8WVB3 486 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SSU72Q9NP77 194 aaKnown RBP15.7■□□□□ 0.1
SCARF1-203ENST00000434376 CASS4Q9NQ75 786 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 TCF7L2Q9NQB0 619 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 APPL1Q9UKG1 709 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 KCNU1A8MYU2 1149 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 RAMP2O60895 175 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SIX3O95343 332 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SLC10A3P09131 477 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SLC18A1P54219 525 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 COG7P83436 770 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SEMA3BQ13214 749 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 ANO4Q32M45 955 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SFT2D3Q587I9 215 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 PITRM1Q5JRX3 1037 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 GDPD5Q8WTR4 605 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 RCOR3Q9P2K3 495 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-203ENST00000434376 SSX2IPQ9Y2D8 614 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 PCDHB5Q9Y5E4 795 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 ALDH2P05091 517 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 PCBP1Q15365 356 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCARF1-203ENST00000434376 RAB41Q5JT25 222 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 PKN3Q6P5Z2 889 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 TMEM135Q86UB9 458 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 ZNF398Q8TD17 642 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 NTAN1Q96AB6 310 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 C7orf26Q96N11 449 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 NPAS2Q99743 824 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 PIF1Q9H611 641 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 GALNT8Q9NY28 637 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 CCDC167Q9P0B6 97 aa15.7■□□□□ 0.1
SCARF1-203ENST00000434376 LRRC37A2A6NM11 1700 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 MLNP12872 115 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 GJA1P17302 382 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 TWF1Q12792 350 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 TRMT5Q32P41 509 aaKnown RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 MS4A13Q5J8X5 152 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 SREK1Q8WXA9 508 aaKnown RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 SUSD3Q96L08 255 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 MRGPRX2Q96LB1 330 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 NAT9Q9BTE0 207 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 ADA2Q9NZK5 511 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 DICER1Q9UPY3 1922 aaKnown RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 IHHQ14623 411 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 PPP1R3AQ16821 1122 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 TBC1D25Q3MII6 688 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 FAM171BQ6P995 826 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 C4orf22Q6V702 233 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 MYLK4Q86YV6 388 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 DRAXINQ8NBI3 349 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 ZFAND2BQ8WV99 257 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 PPP2R3CQ969Q6 453 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 ILKAPQ9H0C8 392 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 TLR9Q9NR96 1032 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 TRHDEQ9UKU6 1024 aa15.69■□□□□ 0.1
SCARF1-203ENST00000434376 AAR2Q9Y312 384 aaKnown RBP15.69■□□□□ 0.1
SCARF1-203ENST00000434376 DLX3O60479 287 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 ANXA9O76027 345 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 TSHRP16473 764 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 PCID2Q5JVF3 399 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 GALNT4Q8N4A0 578 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 OLFM1Q99784 485 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 SLC39A3Q9BRY0 314 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-203ENST00000434376 SOX13Q9UN79 622 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 CAPN8A6NHC0 703 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 TM7SF2O76062 418 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 INHAP05111 366 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 SLC35E2BP0CK96 405 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 GKP32189 559 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 CYP2C18P33260 490 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 MAGEA6P43360 314 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 SLC11A1P49279 550 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 CDK7P50613 346 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 MLLT6P55198 1093 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-203ENST00000434376 PLD1Q13393 1074 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 DCP1BQ8IZD4 617 aaKnown RBP15.68■□□□□ 0.1
SCARF1-203ENST00000434376 PCSK9Q8NBP7 692 aaKnown RBP15.68■□□□□ 0.1
SCARF1-203ENST00000434376 OR9I1Q8NGQ6 314 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 ANKRD49Q8WVL7 239 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 CNBD2Q96M20 576 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 FBRSL1Q9HCM7 1045 aaKnown RBP15.68■□□□□ 0.1
SCARF1-203ENST00000434376 RPL26L1Q9UNX3 145 aaKnown RBP15.68■□□□□ 0.1
SCARF1-203ENST00000434376 V9GYQ6 96 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 MUSKO15146 869 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 MATN3O15232 486 aa15.68■□□□□ 0.1
SCARF1-203ENST00000434376 NCAM2O15394 837 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms