RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 HNF1BP35680 557 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 LIFRP42702 1097 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 SHFQ7M4L6 423 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 CTCFLQ8NI51 663 aaPredicted RBP3.77□□□□□ -1.81
PTPN4-205ENST00000433888 CREB3L4Q8TEY5 395 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 TANKQ92844 425 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 C3orf30Q96M34 536 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 TTC14Q96N46 770 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 TRMT61BQ9BVS5 477 aaKnown RBP3.77□□□□□ -1.81
PTPN4-205ENST00000433888 EGLN1Q9GZT9 426 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 SPATS2LQ9NUQ6 558 aaKnown RBP3.77□□□□□ -1.81
PTPN4-205ENST00000433888 NDRG3Q9UGV2 375 aa3.77□□□□□ -1.81
PTPN4-205ENST00000433888 CACNA1FO60840 1977 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 ADGRF5Q8IZF2 1346 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 A0A0G2JPF8 293 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 HNRNPCL3B7ZW38 293 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 EDIL3O43854 480 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 FGF17O60258 216 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 HNRNPCL1O60812 293 aaKnown RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 SLC22A3O75751 556 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 KRT18P05783 430 aaKnown RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 HNRNPCL4P0DMR1 293 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 CD72P21854 359 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 MCM3P25205 808 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 CST5P28325 142 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 RYKP34925 604 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 PIGAP37287 484 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 TNFAIP2Q03169 654 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 FOXO1Q12778 655 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 TNFAIP1Q13829 316 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 EFNB3Q15768 340 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 SYT16Q17RD7 645 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 C19orf48Q6RUI8 117 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 ZC3HC1Q86WB0 502 aaKnown RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 EPHX4Q8IUS5 362 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 LINS1Q8NG48 757 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 CSGALNACT1Q8TDX6 532 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 RNFT2Q96EX2 444 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 NPLQ9BXD5 320 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 ZNF696Q9H7X3 374 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 ZNF334Q9HCZ1 680 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 SRP68Q9UHB9 627 aaKnown RBP3.76□□□□□ -1.81
PTPN4-205ENST00000433888 TCF19Q9Y242 345 aa3.76□□□□□ -1.81
PTPN4-205ENST00000433888 ANTXRLA6NF34 631 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 EBAG9O00559 213 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 HBP1O60381 514 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 KRT38O76015 456 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 SRCP12931 536 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 SRD5A1P18405 259 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 ITGAXP20702 1163 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 MCM2P49736 904 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 CLCN3P51790 818 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 RBM5P52756 815 aaKnown RBP eCLIP3.75□□□□□ -1.81
PTPN4-205ENST00000433888 PRKAA2P54646 552 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 ATP12AP54707 1039 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 SNAPC3Q92966 411 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 ZNF501Q96CX3 271 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-205ENST00000433888 TWSG1Q9GZX9 223 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 TAF1DQ9H5J8 278 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-205ENST00000433888 CNPY2Q9Y2B0 182 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 LRCH1Q9Y2L9 728 aa3.75□□□□□ -1.81
PTPN4-205ENST00000433888 DHX16O60231 1041 aaKnown RBP3.74□□□□□ -1.81
PTPN4-205ENST00000433888 ZIC3O60481 467 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 NDUFS7O75251 213 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-205ENST00000433888 ERVK11-1P61568 191 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 SLC18A3Q16572 532 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 SOWAHAQ2M3V2 549 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 AMZ1Q400G9 498 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 PAPPA-AS1Q5QFB9 102 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 CBWD5Q5RIA9 395 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 DGLUCYQ7Z3D6 616 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 DSG4Q86SJ6 1040 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 CACNA2D3Q8IZS8 1091 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 GHDCQ8N2G8 530 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 KLHL1Q9NR64 748 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 CYSLTR2Q9NS75 346 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 VDAC3Q9Y277 283 aa3.74□□□□□ -1.81
PTPN4-205ENST00000433888 COL2A1P02458 1487 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-205ENST00000433888 A0A1B0GU03 582 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 A0A1W2PS18 150 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 HMX3A6NHT5 357 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 CBY3A6NI87 242 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 FAM72CH0Y354 149 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 C16orf97H3BN30 126 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 FAM155BO75949 473 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 RGS11O94810 467 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 ATP1A1P05023 1023 aaKnown RBP3.73□□□□□ -1.81
PTPN4-205ENST00000433888 SETSIPP0DME0 302 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 TFPIP10646 304 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 TNNT1P13805 278 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 CD53P19397 219 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 HNRNPH1P31943 449 aaKnown RBP3.73□□□□□ -1.81
PTPN4-205ENST00000433888 ICA1Q05084 483 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 FAM72AQ5TYM5 149 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 FAM72DQ6L9T8 149 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 TOGARAM2Q6ZUX3 1019 aa3.73□□□□□ -1.81
PTPN4-205ENST00000433888 PRSS45Q7RTY3 260 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms