RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 RTN4Q9NQC3 1192 aaKnown RBP22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 SPASTQ9UBP0 616 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 MYO6Q9UM54 1294 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 ANKRD36A6QL64 1941 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 ASXL3Q9C0F0 2248 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 TSPAN11A1L157 253 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 RRP8O43159 456 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 USP12O75317 370 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 PRKCGP05129 697 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 TGM2P21980 687 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 HTR7P34969 479 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 ACTN2P35609 894 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 EIF4A3P38919 411 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 PAPOLAP51003 745 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 NDST2P52849 883 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 TMEM52BQ4KMG9 183 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 CAVIN1Q6NZI2 390 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 ZSWIM9Q86XI8 627 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 BTN2A2Q8WVV5 523 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 FGF11Q92914 225 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 NAT10Q9H0A0 1025 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 SUV39H2Q9H5I1 410 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 HAUS4Q9H6D7 363 aa22.02■■□□□ 1.12
RPUSD3-206ENST00000433535 BUB1BO60566 1050 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 CELA2BP08218 269 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 C6P13671 934 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 ADKP55263 362 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 YPEL5P62699 121 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 GABREP78334 506 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 ELP6Q0PNE2 266 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 CCDC173Q0VFZ6 552 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 NR0B2Q15466 257 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 TCEA2Q15560 299 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 UGP2Q16851 508 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 CFAP58Q5T655 872 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 FAXCQ5TGI0 409 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 PPP1R2P3Q6NXS1 205 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 RFX8Q6ZV50 586 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 NYAP1Q6ZVC0 841 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 CYP4V2Q6ZWL3 525 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 ZNF571Q7Z3V5 609 aaPredicted RBP22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 CAMK1DQ8IU85 385 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 NPWQ8N729 165 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 SLC13A1Q9BZW2 595 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 CLPBQ9H078 707 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 SALL4Q9UJQ4 1053 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 RAI2Q9Y5P3 530 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 LRP4O75096 1905 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 LOC400499M0QZD8 3231 aa22.01■■□□□ 1.11
RPUSD3-206ENST00000433535 PTPRQQ9UMZ3 2332 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 ARHGAP42A6NI28 874 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 TPP1O14773 563 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 MUSKO15146 869 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 CASC3O15234 703 aaKnown RBP22■■□□□ 1.11
RPUSD3-206ENST00000433535 MIPP30301 263 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 ACAP1Q15027 740 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 LRRC14Q15048 493 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 WSCD2Q2TBF2 565 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 PPP6R3Q5H9R7 873 aaPredicted RBP22■■□□□ 1.11
RPUSD3-206ENST00000433535 PERM1Q5SV97 790 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 ERMARDQ5T6L9 678 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 ARHGAP36Q6ZRI8 547 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 ARHGAP12Q8IWW6 846 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 SLC35F3Q8IY50 421 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 TSEN2Q8NCE0 465 aaKnown RBP22■■□□□ 1.11
RPUSD3-206ENST00000433535 ZNF653Q96CK0 615 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 BOCQ9BWV1 1114 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 DONSONQ9NYP3 566 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 NCKIPSDQ9NZQ3 722 aa22■■□□□ 1.11
RPUSD3-206ENST00000433535 FASNP49327 2511 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 TMEM191CA6NGB0 347 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 LMO7DNF2Z398 122 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 DFFAO00273 331 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 RIOK3O14730 519 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 DAPK3O43293 454 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 PALMO75781 387 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 FTLP02792 175 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 ANXA6P08133 673 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 TSHRP16473 764 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 ERCC2P18074 760 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 MMP12P39900 470 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 SUOXP51687 545 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 PPARDQ03181 441 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 GRM3Q14832 879 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 C6orf132Q5T0Z8 1188 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 AFMIDQ63HM1 303 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 ERAP2Q6P179 960 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 HCAR2Q8TDS4 363 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 ZNF641Q96N77 438 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 TUBGCP5Q96RT8 1024 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 BPIFA3Q9BQP9 254 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 CINPQ9BW66 212 aaPredicted RBP21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 SP110Q9HB58 689 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 CNOT8Q9UFF9 292 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 ATP8A1Q9Y2Q0 1164 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 OR1A2Q9Y585 309 aa21.99■■□□□ 1.11
RPUSD3-206ENST00000433535 RP1P56715 2156 aa21.98■■□□□ 1.11
RPUSD3-206ENST00000433535 EME2A4GXA9 379 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-206ENST00000433535 EIF3CLB5ME19 914 aaKnown RBP21.98■■□□□ 1.11
RPUSD3-206ENST00000433535 DDX3XO00571 662 aaKnown RBP eCLIP21.98■■□□□ 1.112e-8■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms