RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-202ENST00000433297 TMEM98Q9Y2Y6 226 aa11.64□□□□□ -0.55
HMGCS1-202ENST00000433297 TCAF1Q9Y4C2 921 aa11.64□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC35E2BP0CK96 405 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 CAPGP40121 348 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 NKX2-5P52952 324 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC12A2P55011 1212 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 PPIL2Q13356 520 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 SF3B4Q15427 424 aaKnown RBP eCLIP11.63□□□□□ -0.551e-6■■■□□ 15.6
HMGCS1-202ENST00000433297 IMPG1Q17R60 797 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 FAM83EQ2M2I3 478 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 CEP97Q8IW35 865 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 PNPLA1Q8N8W4 532 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 TXNDC5Q8NBS9 432 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ADAMTS16Q8TE57 1224 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 STYXQ8WUJ0 223 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ELMO2Q96JJ3 720 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 CDHR1Q96JP9 859 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 MUS81Q96NY9 551 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 LHPPQ9H008 270 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 SMPD3Q9NY59 655 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 TMEM181Q9P2C4 612 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 PSME2Q9UL46 239 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ATP11BQ9Y2G3 1177 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 MAFBQ9Y5Q3 323 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 B4GALT4O60513 344 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 XYLBO75191 536 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 IL18RAPO95256 599 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 AHSGP02765 367 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 HSPA1AP0DMV8 641 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 HSPA1BP0DMV9 641 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 TCEA1P23193 301 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 GJA9P57773 515 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 YBX1P67809 324 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 GRM1Q13255 1194 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 POLD3Q15054 466 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 SOWAHAQ2M3V2 549 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 LCLAT1Q6UWP7 414 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 PSTKQ8IV42 348 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 CENPLQ8N0S6 344 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 Q8N9G6 341 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 MFSD2AQ8NA29 543 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ABHD11Q8NFV4 315 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 DNAJB14Q8TBM8 379 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 EXT2Q93063 718 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 CENPNQ96H22 339 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ALPK1Q96QP1 1244 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 FTHL17Q9BXU8 183 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 PDZD7Q9H5P4 517 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 KIAA1522Q9P206 1035 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ZNF229Q9UJW7 825 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC30A1Q9Y6M5 507 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 A6NL46 340 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 VWA5AO00534 786 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 NME4O00746 187 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 HCRTO43612 131 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 RSL1D1O76021 490 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ALBP02768 609 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 HPCAL1P37235 193 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 RPS9P46781 194 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 DSG4Q86SJ6 1040 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 TMEM135Q86UB9 458 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 ERO1BQ86YB8 467 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 PCYOX1LQ8NBM8 494 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 UHRF1Q96T88 793 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 CSF3RQ99062 836 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 DOK1Q99704 481 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 SPON1Q9HCB6 807 aa11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 MAP3K20Q9NYL2 800 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 TMA7Q9Y2S6 64 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-202ENST00000433297 KLRG2A4D1S0 409 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CLDN25C9JDP6 229 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 STMN1P16949 149 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CES1P23141 567 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 GSSP48637 474 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 GALNT2Q10471 571 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CRTC3Q6UUV7 619 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 ZC3HC1Q86WB0 502 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 USP33Q8TEY7 942 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CAPSLQ8WWF8 208 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 C1QTNF1Q9BXJ1 281 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 OSBPL2Q9H1P3 480 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 TPK1Q9H3S4 243 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 SMARCAD1Q9H4L7 1026 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 ARMC1Q9NVT9 282 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PTPRFP10586 1907 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PTGES3LE9PB15 166 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 PFDN6O15212 129 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 STAG3L1P0CL83 205 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CYP2C9P11712 490 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 ALDH4A1P30038 563 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 CA8P35219 290 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 HK2P52789 917 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 POU6F1Q14863 301 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 SPCS2Q15005 226 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 RPS6KA2Q15349 733 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 TSTD2Q5T7W7 516 aa11.62□□□□□ -0.55
HMGCS1-202ENST00000433297 INTS11Q5TA45 600 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms