RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 ZNF518BQ9C0D4 1074 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 MKLN1Q9UL63 735 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 STMND1H3BQB6 276 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 SLC28A2O43868 658 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 SSX4O60224 188 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 GH1P01241 217 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 DGKAP23743 735 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 PGDP52209 483 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 PHC1P78364 1004 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 KCNK18Q7Z418 384 aa16.56■□□□□ 0.24
RIF1-204ENST00000430328 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 MTHFD1P11586 935 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 DPYSQ14117 519 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 FAM92BQ6ZTR7 304 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 APTXQ7Z2E3 356 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 CYP11B1P15538 503 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 TXNL4AP83876 142 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 CARTPTQ16568 116 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 LSM12Q3MHD2 195 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 ZNF563Q8TA94 476 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 SPATA9Q9BWV2 254 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 CLDN25C9JDP6 229 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 SUV39H1O43463 412 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 TFRCP02786 760 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 PVALBP20472 110 aaPredicted RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 AKT2P31751 481 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 CRY1Q16526 586 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 PRR23CQ6ZRP0 262 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 PHC2Q8IXK0 858 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 PM20D2Q8IYS1 436 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 KCNQ3O43525 872 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 IPO13O94829 963 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 GADD45AP24522 165 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 CDH5P33151 784 aaPredicted RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 CRY2Q49AN0 593 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 OVOS1Q6IE37 1185 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 TBC1D21Q8IYX1 336 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 SMG7Q92540 1137 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 ZNF700Q9H0M5 742 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 A0A087WZ62 844 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 CLPXO76031 633 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 ALADP13716 330 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 CA9Q16790 459 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 LDHDQ86WU2 507 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 TLR8Q9NR97 1041 aaKnown RBP16.55■□□□□ 0.24
RIF1-204ENST00000430328 PADI2Q9Y2J8 665 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 SH2D3AQ9BRG2 576 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 COMMD4Q9H0A8 199 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 SOHLH2Q9NX45 425 aa16.55■□□□□ 0.24
RIF1-204ENST00000430328 H0YJX3 145 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 I3L521 148 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 SCN2BO60939 215 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 SPARCP09486 303 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 HOXB8P17481 243 aaPredicted RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 DRG2P55039 364 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 EFEMP1Q12805 493 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 TAS2R7Q9NYW3 318 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 S100PP25815 95 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ELK3P41970 407 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ARCN1P48444 511 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 GRAPQ13588 217 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ZNF730Q6ZMV8 503 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 TMEM17Q86X19 198 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 CCR1P32246 355 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 RASGEF1BQ0VAM2 473 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ZCCHC23Q6ZST2 131 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 BEND5Q7L4P6 421 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 PPP3R2Q96LZ3 170 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 MYMKA6NI61 221 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 PDCD5O14737 125 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 PIGNO95427 931 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 VDRP11473 427 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 CTSEP14091 401 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 PGAM2P15259 253 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ZNF12P17014 697 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 GNALP38405 381 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 HAGHLQ6PII5 290 aaPredicted RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 PIWIL2Q8TC59 973 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 ANKZF1Q9H8Y5 726 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 TMEM51Q9NW97 253 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 AP4B1Q9Y6B7 739 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 NOTOA8MTQ0 251 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ACAT1P24752 427 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 MAN2A2P49641 1150 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 PTENP60484 403 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 STAG3L4Q8TBR4 150 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 MGAT1P26572 445 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 TUFMP49411 452 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 SP140Q13342 867 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 RFKQ969G6 155 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 NXPE2Q96DL1 559 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms