RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 DPF3Q92784 378 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 FAR2Q96K12 515 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 CIB1Q99828 191 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 ARHGAP39Q9C0H5 1083 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 TKTL2Q9H0I9 626 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 WDCPQ9H6R7 721 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 CYP4F12Q9HCS2 524 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 VTA1Q9NP79 307 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 SARDHQ9UL12 918 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
LINC00839-202ENST00000429940 MYRFQ9Y2G1 1151 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 H3BNH8 94 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 LRIG2O94898 1065 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 MT-CYBP00156 380 aaPredicted RBP15.14■□□□□ 0.01
LINC00839-202ENST00000429940 USP17L7P0C7H9 530 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 ARNTP27540 789 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 SLC7A1P30825 629 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 TM4SF4P48230 202 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 ARCN1P48444 511 aaKnown RBP15.14■□□□□ 0.01
LINC00839-202ENST00000429940 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 COG7P83436 770 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 PPP1R3AQ16821 1122 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 EML3Q32P44 896 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 WSCD1Q658N2 575 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 GPRIN1Q7Z2K8 1008 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 CTU1Q7Z7A3 348 aaKnown RBP15.14■□□□□ 0.01
LINC00839-202ENST00000429940 RIN3Q8TB24 985 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 PBXIP1Q96AQ6 731 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 TMIGD2Q96BF3 282 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 PGAP3Q96FM1 320 aaPredicted RBP15.14■□□□□ 0.01
LINC00839-202ENST00000429940 SLC29A1Q99808 456 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 NOL11Q9H8H0 719 aaKnown RBP15.14■□□□□ 0.01
LINC00839-202ENST00000429940 MEAF6Q9HAF1 191 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 CHST12Q9NRB3 414 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 PNPLA3Q9NST1 481 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 LMCD1Q9NZU5 365 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 SLC2A6Q9UGQ3 507 aa15.14■□□□□ 0.01
LINC00839-202ENST00000429940 A0A0J9YVX5 310 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 TCRBV3S1A0A5B6 114 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 DFFAO00273 331 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 SNRPB2P08579 225 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 KCNE1P15382 129 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CD151P48509 253 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CAP1Q01518 475 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 SREBF2Q12772 1141 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CSHL1Q14406 222 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 KIAA0319Q5VV43 1072 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ZNF470Q6ECI4 717 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 LAYNQ6UX15 382 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ERI1Q8IV48 349 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 EDEM1Q92611 657 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 PPWD1Q96BP3 646 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 RMND5BQ96G75 393 aaPredicted RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 EFHD1Q9BUP0 239 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 FICDQ9BVA6 458 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 EML4Q9HC35 981 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 TNFRSF12AQ9NP84 129 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 IPO11Q9UI26 975 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CNOT6Q9ULM6 557 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 GMEB1Q9Y692 573 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ZNF236Q9UL36 1845 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 MRASO14807 208 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CACNG3O60359 315 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 GPC4O75487 556 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 DARSP14868 501 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ALDH3B2P48448 385 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CDK9P50750 372 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 APLP1P51693 650 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 GRB14Q14449 540 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 PSMD5Q16401 504 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 PRAMEF19Q5SWL8 479 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ZNF280DQ6N043 979 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 HMBOX1Q6NT76 420 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ARHGAP36Q6ZRI8 547 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 LPCAT2Q7L5N7 544 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 RNF135Q8IUD6 432 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 SNX31Q8N9S9 440 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 C2CD4AQ8NCU7 369 aaPredicted RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 GRIN3AQ8TCU5 1115 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 LZICQ8WZA0 190 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 DUS3LQ96G46 650 aaKnown RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 TSGA13Q96PP4 275 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 UHRF1Q96T88 793 aaPredicted RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 ZFYVE28Q9HCC9 887 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CNGB3Q9NQW8 809 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 IGSF5Q9NSI5 407 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 CD300AQ9UGN4 299 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.13■□□□□ 0.01
LINC00839-202ENST00000429940 SQORQ9Y6N5 450 aa15.13■□□□□ 0.01
LINC00839-202ENST00000429940 NUP205Q92621 2012 aa15.12■□□□□ 0.01
LINC00839-202ENST00000429940 SRP72O76094 671 aaKnown RBP15.12■□□□□ 0.01
LINC00839-202ENST00000429940 CCDC166P0CW27 439 aa15.12■□□□□ 0.01
LINC00839-202ENST00000429940 ZNF135P52742 658 aaPredicted RBP15.12■□□□□ 0.01
LINC00839-202ENST00000429940 ADARP55265 1226 aaKnown RBP15.12■□□□□ 0.01
LINC00839-202ENST00000429940 POU4F1Q01851 419 aa15.12■□□□□ 0.01
LINC00839-202ENST00000429940 CCL14Q16627 93 aa15.12■□□□□ 0.01
LINC00839-202ENST00000429940 SAMD4BQ5PRF9 694 aaKnown RBP15.12■□□□□ 0.01
LINC00839-202ENST00000429940 C6orf10Q5SRN2 563 aa15.12■□□□□ 0.01
LINC00839-202ENST00000429940 RPS27LQ71UM5 84 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms