RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TAS2R38P59533 333 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 TRAF2Q12933 501 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 UGP2Q16851 508 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 BRAT1Q6PJG6 821 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 ASCL5Q7RTU5 278 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 GSTA5Q7RTV2 222 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 ZNF567Q8N184 647 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 DCLK2Q8N568 766 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 SPATA22Q8NHS9 363 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 MAIP1Q8WWC4 291 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 TEKT5Q96M29 485 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 OSBPL9Q96SU4 736 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 NAPGQ99747 312 aaPredicted RBP14.68□□□□□ -0.06
SGCE-204ENST00000428696 TMEM121Q9BTD3 319 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 AP1M1Q9BXS5 423 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 PCDH12Q9NPG4 1184 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 TRHDEQ9UKU6 1024 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 ARIH1Q9Y4X5 557 aaPredicted RBP14.68□□□□□ -0.06
SGCE-204ENST00000428696 FADS3Q9Y5Q0 445 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 ZFHX2Q9C0A1 2572 aaPredicted RBP14.68□□□□□ -0.06
SGCE-204ENST00000428696 ABCA7Q8IZY2 2146 aa14.68□□□□□ -0.06
SGCE-204ENST00000428696 BCLAF3A2AJT9 711 aaKnown RBP14.67□□□□□ -0.06
SGCE-204ENST00000428696 UPK3BL1B0FP48 263 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 UPK3BL2E5RIL1 263 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 ZNF185O15231 689 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 MMP20O60882 483 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SOCS5O75159 536 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CPP00450 1065 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 IFNB1P01574 187 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CFIP05156 583 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 PRLRP16471 622 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CTPS1P17812 591 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 NFKB1P19838 968 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CR2P20023 1033 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CA4P22748 312 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CASQ1P31415 396 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SPEM2Q0P670 501 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SGCGQ13326 291 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 RALGPS1Q5JS13 557 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 DENND2CQ68D51 928 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 PRPF39Q86UA1 669 aaKnown RBP14.67□□□□□ -0.06
SGCE-204ENST00000428696 ZSWIM9Q86XI8 627 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 NDUFAF2Q8N183 169 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 ARRDC2Q8TBH0 407 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CCDC110Q8TBZ0 833 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CXorf40AQ8TE69 158 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 COG1Q8WTW3 980 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 RAB7BQ96AH8 199 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 RMDN1Q96DB5 314 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 IFT43Q96FT9 208 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 CAPZA3Q96KX2 299 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 VAT1Q99536 393 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 MYOCQ99972 504 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SLC25A51Q9H1U9 297 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SMOC1Q9H4F8 434 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 PREBQ9HCU5 417 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 AASDHPPTQ9NRN7 309 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SMARCAL1Q9NZC9 954 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 DKK3Q9UBP4 350 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 GGT7Q9UJ14 662 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 SNX12Q9UMY4 172 aa14.67□□□□□ -0.06
SGCE-204ENST00000428696 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.67□□□□□ -0.06
SGCE-204ENST00000428696 IGLON5A6NGN9 336 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 LIASO43766 372 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 MT-CYBP00156 380 aaPredicted RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 RETP07949 1114 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PDHA1P08559 390 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 GNSP15586 552 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PPP2CBP62714 309 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PPP2CAP67775 309 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SKOR1P84550 965 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PRPSAP1Q14558 356 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PTPRRQ15256 657 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SPDYCQ5MJ68 293 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 ANKRD20A2Q5SQ80 823 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 ANKRD20A1Q5TYW2 823 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 ANKRD20A3Q5VUR7 823 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SEL1L3Q68CR1 1132 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 CCDC70Q6NSX1 233 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 LPCAT1Q8NF37 534 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 RUBCNQ92622 972 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 KDM4CQ9H3R0 1056 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PCDH9Q9HC56 1237 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 TMEM74BQ9NUR3 256 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 WDR87Q6ZQQ6 2873 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 MYO15AQ9UKN7 3530 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 TRAFD1O14545 582 aaPredicted RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 TSPAN6O43657 245 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 LZTS3O60299 673 aaPredicted RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 GFRA3O60609 400 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PGLSO95336 258 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PAK4O96013 591 aaPredicted RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 MPLP40238 635 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 RPS21P63220 83 aaKnown RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 ELP6Q0PNE2 266 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 GALNT3Q14435 633 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 ITPRIPL1Q6GPH6 555 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SYT10Q6XYQ8 523 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 292.2 ms