RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 KCTD15Q96SI1 283 aaPredicted RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 SNRNP25Q9BV90 132 aaKnown RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 BOCQ9BWV1 1114 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 CATSPERBQ9H7T0 1116 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 USP29Q9HBJ7 922 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 PCDH12Q9NPG4 1184 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 TMEM63CQ9P1W3 806 aa15.68■□□□□ 0.1
SEC13-210ENST00000428626 UBA2Q9UBT2 640 aaPredicted RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 APOBEC3BQ9UH17 382 aaKnown RBP15.68■□□□□ 0.1
SEC13-210ENST00000428626 LRRC53A6NM62 1247 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 TPP1O14773 563 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 FGF10O15520 208 aaPredicted RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 LZTS3O60299 673 aaPredicted RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 PRAMEF11O60813 436 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 USP12O75317 370 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 PRB1P04280 392 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 TSHRP16473 764 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 EIF4A3P38919 411 aaKnown RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 PAPOLAP51003 745 aaKnown RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 DUSP3P51452 185 aaPredicted RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 THOP1P52888 689 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 AIF1P55008 147 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 ADKP55263 362 aaKnown RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 GABREP78334 506 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 TLE3Q04726 772 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 RAD51Q06609 339 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 UGP2Q16851 508 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 AFMIDQ63HM1 303 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 MACC1Q6ZN28 852 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 CAMK1DQ8IU85 385 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 SPACA3Q8IXA5 215 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 NPWQ8N729 165 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 HIC2Q96JB3 615 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 GBP4Q96PP9 640 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 DEPDC7Q96QD5 511 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 SUV39H2Q9H5I1 410 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 DHX35Q9H5Z1 703 aaKnown RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 RTN4Q9NQC3 1192 aaKnown RBP15.67■□□□□ 0.1
SEC13-210ENST00000428626 SPASTQ9UBP0 616 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 PCSK1NQ9UHG2 260 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 SALL4Q9UJQ4 1053 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 AP4E1Q9UPM8 1137 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 CFAP46Q8IYW2 2715 aa15.67■□□□□ 0.1
SEC13-210ENST00000428626 ANKRD62A6NC57 917 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 TMEM191CA6NGB0 347 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 LMO7DNF2Z398 122 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 MUSKO15146 869 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 YY2O15391 372 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 C6P13671 934 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 TNFAIP3P21580 790 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 PSMA2P25787 234 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 ACTN2P35609 894 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
SEC13-210ENST00000428626 NDST2P52849 883 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 PDX1P52945 283 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 YPEL5P62699 121 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 TCEA2Q15560 299 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 ISXQ2M1V0 245 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 ANO6Q4KMQ2 910 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 LRRC69Q6ZNQ3 347 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 ZNF571Q7Z3V5 609 aaPredicted RBP15.66■□□□□ 0.1
SEC13-210ENST00000428626 TSEN2Q8NCE0 465 aaKnown RBP15.66■□□□□ 0.1
SEC13-210ENST00000428626 TSACCQ96A04 125 aaPredicted RBP15.66■□□□□ 0.1
SEC13-210ENST00000428626 NAF1Q96HR8 494 aaKnown RBP15.66■□□□□ 0.1
SEC13-210ENST00000428626 VCPIP1Q96JH7 1222 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 IL12RB2Q99665 862 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 HAUS4Q9H6D7 363 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 ASCL3Q9NQ33 180 aa15.66■□□□□ 0.1
SEC13-210ENST00000428626 HELZ2Q9BYK8 2649 aaKnown RBP15.66■□□□□ 0.1
SEC13-210ENST00000428626 EEF2KO00418 725 aaKnown RBP15.65■□□□□ 0.1
SEC13-210ENST00000428626 DDX3XO00571 662 aaKnown RBP eCLIP15.65■□□□□ 0.15e-9■■■□□ 15.5
SEC13-210ENST00000428626 RIOK3O14730 519 aaKnown RBP15.65■□□□□ 0.1
SEC13-210ENST00000428626 RRP8O43159 456 aaKnown RBP15.65■□□□□ 0.1
SEC13-210ENST00000428626 DXOO77932 396 aaKnown RBP15.65■□□□□ 0.1
SEC13-210ENST00000428626 TCF4P15884 667 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 GM2AP17900 193 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 ERCC2P18074 760 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 MMP12P39900 470 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 LSSP48449 732 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 RALGDSQ12967 914 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 PTK2BQ14289 1009 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 LRRC14Q15048 493 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 NR0B2Q15466 257 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 ALG11Q2TAA5 492 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 C6orf132Q5T0Z8 1188 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 ERMARDQ5T6L9 678 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 FAXCQ5TGI0 409 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 PCSK4Q6UW60 755 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 RFX8Q6ZV50 586 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 PLA2G15Q8NCC3 412 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 BTN2A2Q8WVV5 523 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 ATXN7L3BQ96GX2 97 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 PRR11Q96HE9 360 aaPredicted RBP15.65■□□□□ 0.1
SEC13-210ENST00000428626 FCRL3Q96P31 734 aaPredicted RBP15.65■□□□□ 0.1
SEC13-210ENST00000428626 NCAPGQ9BPX3 1015 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 ABCG4Q9H172 646 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 POLR1BQ9H9Y6 1135 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 PARVAQ9NVD7 372 aa15.65■□□□□ 0.1
SEC13-210ENST00000428626 RABGEF1Q9UJ41 708 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms