RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CDH6P55285 790 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 DAB2P98082 770 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 SLC25A11Q02978 314 aaKnown RBP18.6■□□□□ 0.57
GPC1-205ENST00000427506 BCL2L1Q07817 233 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 FZD2Q14332 565 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 ZNF235Q14590 738 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 LBRQ14739 615 aaKnown RBP18.6■□□□□ 0.57
GPC1-205ENST00000427506 TMEM52BQ4KMG9 183 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 TMCO4Q5TGY1 634 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 H2AFVQ71UI9 128 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 PARGQ86W56 976 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 MARCH9Q86YJ5 346 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 ZNF599Q96NL3 588 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 PCDH12Q9NPG4 1184 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 SEPT3Q9UH03 358 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 TRPM6Q9BX84 2022 aa18.6■□□□□ 0.57
GPC1-205ENST00000427506 MAP1BP46821 2468 aaKnown RBP18.59■□□□□ 0.57
GPC1-205ENST00000427506 TSPAN11A1L157 253 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 FAM149AA5PLN7 773 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 NEMP2A6NFY4 417 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 TRIM38O00635 465 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 SIGLEC6O43699 453 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 CSF2P04141 144 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 SERPINB6P35237 376 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 NSUN2Q08J23 767 aaKnown RBP eCLIP18.59■□□□□ 0.57
GPC1-205ENST00000427506 ZNF211Q13398 564 aaPredicted RBP18.59■□□□□ 0.57
GPC1-205ENST00000427506 PTK2BQ14289 1009 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 SMAD1Q15797 465 aaKnown RBP18.59■□□□□ 0.57
GPC1-205ENST00000427506 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 KDM7AQ6ZMT4 941 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 BBS5Q8N3I7 341 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 OR4C6Q8NH72 309 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 NSMCE1Q8WV22 266 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 TSC1Q92574 1164 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 CENPTQ96BT3 561 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 CAAP1Q9H8G2 361 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 GPR27Q9NS67 375 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 COQ6Q9Y2Z9 468 aa18.59■□□□□ 0.57
GPC1-205ENST00000427506 RIOK3O14730 519 aaKnown RBP18.58■□□□□ 0.56
GPC1-205ENST00000427506 AKR1B10O60218 316 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 LZTS3O60299 673 aaPredicted RBP18.58■□□□□ 0.56
GPC1-205ENST00000427506 PRKCGP05129 697 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 HNF1BP35680 557 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 IGFALSP35858 605 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 PFN3P60673 137 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 SLC10A7Q0GE19 358 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 PROX2Q3B8N5 592 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 TMPRSS12Q86WS5 348 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 VSTM4Q8IW00 320 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 ATPAF2Q8N5M1 289 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 PSKH2Q96QS6 385 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 DNAJC7Q99615 494 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 PACSIN1Q9BY11 444 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 MBNL1Q9NR56 388 aaKnown RBP18.58■□□□□ 0.56
GPC1-205ENST00000427506 UVRAGQ9P2Y5 699 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 NENFQ9UMX5 172 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 ATP8A1Q9Y2Q0 1164 aa18.58■□□□□ 0.56
GPC1-205ENST00000427506 EPG5Q9HCE0 2579 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 MUSKO15146 869 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 C6P13671 934 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 JUPP14923 745 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 NME1P15531 152 aaKnown RBP18.57■□□□□ 0.56
GPC1-205ENST00000427506 JUNDP17535 347 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 LIG3P49916 1009 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 AP1S1P61966 158 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 YPEL5P62699 121 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 POLR2LP62875 67 aaKnown RBP18.57■□□□□ 0.56
GPC1-205ENST00000427506 SEMG2Q02383 582 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 MMRN1Q13201 1228 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 ILKQ13418 452 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 LRRC14Q15048 493 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 ZFYVE27Q5T4F4 411 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 ZSWIM9Q86XI8 627 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 TP53I13Q8NBR0 393 aaPredicted RBP18.57■□□□□ 0.56
GPC1-205ENST00000427506 KCTD6Q8NC69 237 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 BTN2A2Q8WVV5 523 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 CCDC86Q9H6F5 360 aaKnown RBP18.57■□□□□ 0.56
GPC1-205ENST00000427506 ABHD10Q9NUJ1 306 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 NLGN3Q9NZ94 848 aa18.57■□□□□ 0.56
GPC1-205ENST00000427506 RCOR3Q9P2K3 495 aaPredicted RBP18.57■□□□□ 0.56
GPC1-205ENST00000427506 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.56■□□□□ 0.56
GPC1-205ENST00000427506 TTC24A2A3L6 582 aaPredicted RBP18.56■□□□□ 0.56
GPC1-205ENST00000427506 TMEM110-MUSTN1A8MSY1 372 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 TOR1BO14657 336 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 SCAMP1O15126 338 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 MAFKO60675 156 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 NEBLO76041 1014 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 PROSCO94903 275 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 CD48P09326 243 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 ACP1P24666 158 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 HSPA9P38646 679 aaKnown RBP18.56■□□□□ 0.56
GPC1-205ENST00000427506 MMP12P39900 470 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 ADKP55263 362 aaKnown RBP18.56■□□□□ 0.56
GPC1-205ENST00000427506 CLDN6P56747 220 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 IRF4Q15306 451 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 ATP13A4Q4VNC1 1196 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 TPRG1LQ5T0D9 272 aa18.56■□□□□ 0.56
GPC1-205ENST00000427506 ZNF548Q8NEK5 533 aaPredicted RBP18.56■□□□□ 0.56
GPC1-205ENST00000427506 LMX1AQ8TE12 382 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms