RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 HPCAP84074 193 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 APOFQ13790 326 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SNX17Q15036 470 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 MAPRE2Q15555 327 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF792Q3KQV3 632 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 PAN2Q504Q3 1202 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 FASTKD5Q7L8L6 764 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 TAC4Q86UU9 113 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 HMGCLL1Q8TB92 370 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 FAM110BQ8TC76 370 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 CANT1Q8WVQ1 401 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SPON1Q9HCB6 807 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 CNGB3Q9NQW8 809 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 UTP6Q9NYH9 597 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 GIMAP2Q9UG22 337 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 EGFL7Q9UHF1 273 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SFMBT1Q9UHJ3 866 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 MYRFQ9Y2G1 1151 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 RRN3P2A6NIE6 340 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 A8MT66 165 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 AP3B1O00203 1094 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 PSMD3O43242 534 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 NRP2O60462 931 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ANXA9O76027 345 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SRP72O76094 671 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 H6PDO95479 791 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 F9P00740 461 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 PENKP01210 267 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC4A1P02730 911 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 PAMP19021 973 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 UGT1A6P19224 532 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SCNN1BP51168 640 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 AFF1P51825 1210 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ADARP55265 1226 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SCAPQ12770 1279 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 LRP8Q14114 963 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 INTS6LQ5JSJ4 861 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 KLC3Q6P597 504 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 DHFR2Q86XF0 187 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF354CQ86Y25 554 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 CHERPQ8IWX8 916 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 GPC2Q8N158 579 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 FAM47BQ8NA70 645 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SNRNP27Q8WVK2 155 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SLCO4A1Q96BD0 722 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 RMND5BQ96G75 393 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 OLFM1Q99784 485 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 OSBPL11Q9BXB4 747 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ALG9Q9H6U8 611 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 EML4Q9HC35 981 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 MRPL40Q9NQ50 206 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 RSL24D1Q9UHA3 163 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 TCAF1Q9Y4C2 921 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 TRAF6Q9Y4K3 522 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 PDLIM1O00151 329 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 TREHO43280 583 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 IPO13O94829 963 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 KCNE1P15382 129 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 BDNFP23560 247 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 KPNA2P52292 529 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SQLEQ14534 574 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 AGAP9Q5VTM2 703 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 DENND5AQ6IQ26 1287 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF786Q8N393 782 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 CDCA5Q96FF9 252 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF419Q96HQ0 510 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 MAELQ96JY0 434 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC2A11Q9BYW1 496 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC39A8Q9C0K1 460 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 UPF3AQ9H1J1 476 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 NDFIP2Q9NV92 336 aa7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 SUCOQ9UBS9 1254 aaKnown RBP7.58□□□□□ -1.2
SMARCC1-202ENST00000425518 A0A087X1B8 175 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 RNF103-CHMP3A0A140T963 221 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 NR5A2O00482 541 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 HSPA8P11142 646 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CXCR3P49682 368 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 NDST2P52849 883 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 AIF1P55008 147 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 STX1BP61266 288 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 ADRM1Q16186 407 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 UBXN11Q5T124 520 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 DCLRE1AQ6PJP8 1040 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CHSY3Q70JA7 882 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 IFNEQ86WN2 208 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 ANKRD49Q8WVL7 239 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 LRCH3Q96II8 777 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF597Q96LX8 424 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 GAD1Q99259 594 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC25A23Q9BV35 468 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 TRIM8Q9BZR9 551 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 IGSF5Q9NSI5 407 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 MPP6Q9NZW5 540 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 DSEQ9UL01 958 aa7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 CNOT6Q9ULM6 557 aaKnown RBP7.57□□□□□ -1.2
SMARCC1-202ENST00000425518 FAF1Q9UNN5 650 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms