RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ISCUQ9H1K1 167 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 TSPY26PQ9H489 355 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 NOL6Q9H6R4 1146 aaKnown RBP12.9□□□□□ -0.34
SGCE-203ENST00000425444 ARHGAP20Q9P2F6 1191 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.9□□□□□ -0.34
SGCE-203ENST00000425444 RP1L1Q8IWN7 2480 aaPredicted RBP12.89□□□□□ -0.35
SGCE-203ENST00000425444 A0A1W2PR77 199 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 C10orf142B7Z368 130 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 PRAMEF26H0Y7S4 382 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 K7ENP7 123 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 TLR4O00206 839 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 SLC31A1O15431 190 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 YKT6O15498 198 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 LRCH4O75427 683 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 UGT2B4P06133 528 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 ADRB3P13945 408 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 AKT2P31751 481 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 CASP14P31944 242 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 GKP32189 559 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 NXPH1P58417 271 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 ERVPABLB-1P60509 514 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 NFKB2Q00653 900 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 RAD51Q06609 339 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 ATXN7L2Q5T6C5 722 aaPredicted RBP12.89□□□□□ -0.35
SGCE-203ENST00000425444 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 INO80CQ6PI98 192 aaPredicted RBP12.89□□□□□ -0.35
SGCE-203ENST00000425444 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 UMODL1-AS1Q8N2C9 162 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 OXR1Q8N573 874 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
SGCE-203ENST00000425444 OSBPL1AQ9BXW6 950 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 THAP2Q9H0W7 228 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 FZD3Q9NPG1 666 aa12.89□□□□□ -0.35
SGCE-203ENST00000425444 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
SGCE-203ENST00000425444 NEMP1O14524 444 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 MYF5P13349 255 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
SGCE-203ENST00000425444 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
SGCE-203ENST00000425444 ARRB1P49407 418 aaPredicted RBP12.88□□□□□ -0.35
SGCE-203ENST00000425444 NDST2P52849 883 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 E2F1Q01094 437 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 SERINC3Q13530 473 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 SMTNL2Q2TAL5 461 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 MYLK3Q32MK0 819 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
SGCE-203ENST00000425444 ZNF805Q5CZA5 627 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 CCDC122Q5T0U0 273 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 SEL1L3Q68CR1 1132 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 KIAA1161Q6NSJ0 714 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 ALKBH5Q6P6C2 394 aaKnown RBP12.88□□□□□ -0.35
SGCE-203ENST00000425444 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 IQCHQ86VS3 1027 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 PSTKQ8IV42 348 aaKnown RBP12.88□□□□□ -0.35
SGCE-203ENST00000425444 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 EXD3Q8N9H8 876 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 MFSD2AQ8NA29 543 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 NETO2Q8NC67 525 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 RNF214Q8ND24 703 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 HSPH1Q92598 858 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 EXOC2Q96KP1 924 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 DEF6Q9H4E7 631 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 SP110Q9HB58 689 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 ANAPC7Q9UJX3 599 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 ITPR3Q14573 2671 aa12.88□□□□□ -0.35
SGCE-203ENST00000425444 A0A087X0T9 212 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 ARHGAP42A6NI28 874 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 C16orf96A6NNT2 1141 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 H3BRJ5 948 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 DFFAO00273 331 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 USP12O75317 370 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 DXOO77932 396 aaKnown RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 TPM1P09493 284 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 FAM228BP0C875 321 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 ERCC2P18074 760 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 PCK1P35558 622 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 ARL4AP40617 200 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 ZNF135P52742 658 aaPredicted RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 RPS21P63220 83 aaKnown RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 OVGP1Q12889 678 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 BNIP3Q12983 259 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 TRIM14Q14142 442 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
SGCE-203ENST00000425444 ZNF284Q2VY69 593 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 CFAP58Q5T655 872 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 SPECC1LQ69YQ0 1117 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 GDPD4Q6W3E5 623 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 KLHDC7BQ96G42 594 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 BTBD6Q96KE9 485 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 KLHL32Q96NJ5 620 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 NUP85Q9BW27 656 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 CALN1Q9BXU9 219 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
SGCE-203ENST00000425444 THSD1Q9NS62 852 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms