RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 PDCD7Q8N8D1 485 aaKnown RBP16.73■□□□□ 0.27
SHANK2-207ENST00000425049 NIPA2Q8N8Q9 360 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 TSEN2Q8NCE0 465 aaKnown RBP16.73■□□□□ 0.27
SHANK2-207ENST00000425049 ZNF548Q8NEK5 533 aaPredicted RBP16.73■□□□□ 0.27
SHANK2-207ENST00000425049 NSMCE1Q8WV22 266 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 TEKT4Q8WW24 435 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 XPO4Q9C0E2 1151 aaKnown RBP16.73■□□□□ 0.27
SHANK2-207ENST00000425049 DEF6Q9H4E7 631 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 PCDH12Q9NPG4 1184 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 GPR27Q9NS67 375 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 ATP8A1Q9Y2Q0 1164 aa16.73■□□□□ 0.27
SHANK2-207ENST00000425049 A0A087X0T9 212 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 TSPAN11A1L157 253 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 TOR1BO14657 336 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 LZTS3O60299 673 aaPredicted RBP16.72■□□□□ 0.27
SHANK2-207ENST00000425049 CSF2P04141 144 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 CYP1A2P05177 515 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 FAM228BP0C875 321 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 JUNDP17535 347 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 ACP1P24666 158 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 IL1R2P27930 398 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 CASP14P31944 242 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 IGFALSP35858 605 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 PFN3P60673 137 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 AP1S1P61966 158 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 BCL2L1Q07817 233 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 TMEM52BQ4KMG9 183 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 MARCH9Q86YJ5 346 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 CAMK1DQ8IU85 385 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 ATPAF2Q8N5M1 289 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 MDM1Q8TC05 714 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 BTN2A2Q8WVV5 523 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 VOPP1Q96AW1 172 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 CENPTQ96BT3 561 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 NXPE2Q96DL1 559 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 BTBD6Q96KE9 485 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 ZNF599Q96NL3 588 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 CSPG4P5Q96PW8 444 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 ZNHIT6Q9NWK9 470 aaKnown RBP16.72■□□□□ 0.27
SHANK2-207ENST00000425049 ASPMQ8IZT6 3477 aa16.72■□□□□ 0.27
SHANK2-207ENST00000425049 PTPRBP23467 1997 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 TRABD2BA6NFA1 517 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 SCAMP1O15126 338 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 RARAP10276 462 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 C6P13671 934 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 TCF4P15884 667 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 ITIH2P19823 946 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 AMPD1P23109 780 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 HSPA9P38646 679 aaKnown RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 SCNN1BP51168 640 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 YPEL5P62699 121 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 POLR2LP62875 67 aaKnown RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 E2F1Q01094 437 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 LBRQ14739 615 aaKnown RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 LRRC14Q15048 493 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 IRF4Q15306 451 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 TSR1Q2NL82 804 aaKnown RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 ARHGAP36Q6ZRI8 547 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 ZNF564Q8TBZ8 553 aaPredicted RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 LMX1AQ8TE12 382 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 SLC13A1Q9BZW2 595 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 USP29Q9HBJ7 922 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 NCKIPSDQ9NZQ3 722 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 CTTNBP2NLQ9P2B4 639 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 SPASTQ9UBP0 616 aa16.71■□□□□ 0.27
SHANK2-207ENST00000425049 APOBEC3BQ9UH17 382 aaKnown RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 GOLGA4Q13439 2230 aaKnown RBP16.71■□□□□ 0.27
SHANK2-207ENST00000425049 RIOK3O14730 519 aaKnown RBP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 AQP9O43315 295 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 BUB1BO60566 1050 aaPredicted RBP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 NFKBIAP25963 317 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 HTR1BP28222 390 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 GJC1P36383 396 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 EIF4A3P38919 411 aaKnown RBP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 MMP12P39900 470 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 RGRP47804 291 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 CDH6P55285 790 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 NSUN2Q08J23 767 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 SPECC1LQ69YQ0 1117 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 ZCCHC8Q6NZY4 707 aaKnown RBP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 MACC1Q6ZN28 852 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 PHACTR4Q8IZ21 702 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 TP53I13Q8NBR0 393 aaPredicted RBP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 APOLD1Q96LR9 279 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 PSKH2Q96QS6 385 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 IL12RB2Q99665 862 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 PCDH18Q9HCL0 1135 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 RCOR3Q9P2K3 495 aaPredicted RBP16.7■□□□□ 0.26
SHANK2-207ENST00000425049 LCMT1Q9UIC8 334 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 COQ6Q9Y2Z9 468 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 CSNK1G3Q9Y6M4 447 aa16.7■□□□□ 0.26
SHANK2-207ENST00000425049 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.69■□□□□ 0.26
SHANK2-207ENST00000425049 TMEM110-MUSTN1A8MSY1 372 aa16.69■□□□□ 0.26
SHANK2-207ENST00000425049 K7ESM1 405 aa16.69■□□□□ 0.26
SHANK2-207ENST00000425049 NEBLO76041 1014 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms