RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 EDEM3Q9BZQ6 932 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 MBNL1Q9NR56 388 aaKnown RBP16.33■□□□□ 0.2
PUDP-203ENST00000424830 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 RABGEF1Q9UJ41 708 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 GPR34Q9UPC5 381 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 LOXL2Q9Y4K0 774 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 SCN8AQ9UQD0 1980 aa16.33■□□□□ 0.2
PUDP-203ENST00000424830 UNC13CQ8NB66 2214 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 GOLGA8SH3BPF8 625 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 TERTO14746 1132 aaKnown RBP16.32■□□□□ 0.2
PUDP-203ENST00000424830 NOBOXO60393 691 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 RAMP2O60895 175 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 RASGRP1O95267 797 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 PNMA6AP0CW24 399 aaPredicted RBP16.32■□□□□ 0.2
PUDP-203ENST00000424830 XPAP23025 273 aaPredicted RBP16.32■□□□□ 0.2
PUDP-203ENST00000424830 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
PUDP-203ENST00000424830 IRF4Q15306 451 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 TCEA2Q15560 299 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 MANEAQ5SRI9 462 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 RD3Q7Z3Z2 195 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 BNIPLQ7Z465 357 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 FAM71AQ8IYT1 594 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 ATL2Q8NHH9 583 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 TMEM159Q96B96 161 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 WRAP53Q9BUR4 548 aaKnown RBP16.32■□□□□ 0.2
PUDP-203ENST00000424830 MAGEH1Q9H213 219 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 LRRN3Q9H3W5 708 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 OR12D3Q9UGF7 316 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 AJAP1Q9UKB5 411 aaPredicted RBP16.32■□□□□ 0.2
PUDP-203ENST00000424830 PCDHB11Q9Y5F2 797 aa16.32■□□□□ 0.2
PUDP-203ENST00000424830 A0A1W2PQM1 296 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 ZSCAN5CA6NGD5 496 aaPredicted RBP16.31■□□□□ 0.2
PUDP-203ENST00000424830 IGSF6O95976 241 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 FAM87AP0C7U9 286 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 RHOQP17081 205 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 ATP11AP98196 1134 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 ELP6Q0PNE2 266 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 LRRC14Q15048 493 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 ALG11Q2TAA5 492 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 ATXN7L2Q5T6C5 722 aaPredicted RBP16.31■□□□□ 0.2
PUDP-203ENST00000424830 LEKR1Q6ZMV7 388 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 ZNF354CQ86Y25 554 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 TSACCQ96A04 125 aaPredicted RBP16.31■□□□□ 0.2
PUDP-203ENST00000424830 NDFIP2Q9NV92 336 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 RWDD2AQ9UIY3 292 aa16.31■□□□□ 0.2
PUDP-203ENST00000424830 LRP4O75096 1905 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 FAM170AA1A519 330 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 SYCE3A1L190 88 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
PUDP-203ENST00000424830 CYP11B1P15538 503 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 MTIF2P46199 727 aaKnown RBP16.3■□□□□ 0.2
PUDP-203ENST00000424830 SUOXP51687 545 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 NFKB2Q00653 900 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 NRG1Q02297 640 aaPredicted RBP16.3■□□□□ 0.2
PUDP-203ENST00000424830 SRSF6Q13247 344 aaKnown RBP16.3■□□□□ 0.2
PUDP-203ENST00000424830 NFATC4Q14934 902 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 ENPP7Q6UWV6 458 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 ARCQ7LC44 396 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 NLRP14Q86W24 1093 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 CCNJLQ8IV13 435 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 CMKLR1Q99788 373 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 SEMA3CQ99985 751 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 TMEM248Q9NWD8 314 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 DKK3Q9UBP4 350 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 KLQ9UEF7 1012 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 TMEM59LQ9UK28 342 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 PCDHGA4Q9Y5G9 962 aa16.3■□□□□ 0.2
PUDP-203ENST00000424830 PRAMEF33A0A0G2JMD5 474 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 SUV39H1O43463 412 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 BUB1O43683 1085 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 KDELR3O43731 214 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 PPFIA2O75334 1257 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 TMCC1O94876 653 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 ITGB6P18564 788 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 SRP54P61011 504 aaKnown RBP16.29■□□□□ 0.2
PUDP-203ENST00000424830 RHOAP61586 193 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 CDO1Q16878 200 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 C2CD6Q53TS8 623 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 MANEALQ5VSG8 457 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 ZNF574Q6ZN55 896 aaPredicted RBP16.29■□□□□ 0.2
PUDP-203ENST00000424830 VASH2Q86V25 355 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 Q8N9G6 341 aaPredicted RBP16.29■□□□□ 0.2
PUDP-203ENST00000424830 CASKIN2Q8WXE0 1202 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 VOPP1Q96AW1 172 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 TBC1D31Q96DN5 1066 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 NCAPGQ9BPX3 1015 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 APPL1Q9UKG1 709 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 LRRK2Q5S007 2527 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 LRRK1Q38SD2 2015 aa16.29■□□□□ 0.2
PUDP-203ENST00000424830 TNFP01375 233 aa16.28■□□□□ 0.2
PUDP-203ENST00000424830 TIMP2P16035 220 aa16.28■□□□□ 0.2
PUDP-203ENST00000424830 GLB1P16278 677 aa16.28■□□□□ 0.2
PUDP-203ENST00000424830 ITIH2P19823 946 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms