RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 APOLD1Q96LR9 279 aa16.37■□□□□ 0.21
DDR1-234ENST00000424544 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
DDR1-234ENST00000424544 KCNF1Q9H3M0 494 aa16.37■□□□□ 0.21
DDR1-234ENST00000424544 PDFQ9HBH1 243 aa16.37■□□□□ 0.21
DDR1-234ENST00000424544 SPTLC3Q9NUV7 552 aa16.37■□□□□ 0.21
DDR1-234ENST00000424544 NEMP2A6NFY4 417 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 K7ESM1 405 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 IPO7O95373 1038 aaKnown RBP16.36■□□□□ 0.21
DDR1-234ENST00000424544 FTLP02792 175 aaPredicted RBP16.36■□□□□ 0.21
DDR1-234ENST00000424544 ITIH2P19823 946 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 MAGEA1P43355 309 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 EIF2B5Q13144 721 aaKnown RBP16.36■□□□□ 0.21
DDR1-234ENST00000424544 ZNF542PQ5EBM4 170 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 PDZD3Q86UT5 571 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 RYBPQ8N488 228 aaPredicted RBP16.36■□□□□ 0.21
DDR1-234ENST00000424544 NETO2Q8NC67 525 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 EPAS1Q99814 870 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 DUSP23Q9BVJ7 150 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 CATSPERBQ9H7T0 1116 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 LHX3Q9UBR4 397 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 PNMA8BQ9ULN7 279 aaPredicted RBP16.36■□□□□ 0.21
DDR1-234ENST00000424544 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 CLCA2Q9UQC9 943 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 ITM2BQ9Y287 266 aa16.36■□□□□ 0.21
DDR1-234ENST00000424544 TSPAN11A1L157 253 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 TMEM191CA6NGB0 347 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 FPGTO14772 594 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 INSIG1O15503 277 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 FGF10O15520 208 aaPredicted RBP16.35■□□□□ 0.21
DDR1-234ENST00000424544 TLX3O43711 291 aaPredicted RBP16.35■□□□□ 0.21
DDR1-234ENST00000424544 CREB3O43889 395 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 GP1BAP07359 652 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 EIF2S3P41091 472 aaKnown RBP16.35■□□□□ 0.21
DDR1-234ENST00000424544 NDST2P52849 883 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 TMEM52BQ4KMG9 183 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 AFMIDQ63HM1 303 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 DCUN1D2Q6PH85 259 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 KDM7AQ6ZMT4 941 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 CYP4V2Q6ZWL3 525 aaPredicted RBP16.35■□□□□ 0.21
DDR1-234ENST00000424544 PTAR1Q7Z6K3 402 aaPredicted RBP16.35■□□□□ 0.21
DDR1-234ENST00000424544 PARGQ86W56 976 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 NXPE2Q96DL1 559 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 GDAP1L1Q96MZ0 367 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 PARVAQ9NVD7 372 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 DNAJC28Q9NX36 388 aa16.35■□□□□ 0.21
DDR1-234ENST00000424544 J3KR12 359 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 FFAR2O15552 330 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 LZTS3O60299 673 aaPredicted RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 OPA1O60313 960 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 NEBLO76041 1014 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 IGSF6O95976 241 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 MT-CO3P00414 261 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 H2AFZP0C0S5 128 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 SUOXP51687 545 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 YPEL5P62699 121 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 RAD51Q06609 339 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 PDE1CQ14123 709 aaPredicted RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 AGERQ15109 404 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 CA9Q16790 459 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 SOWAHCQ53LP3 525 aaPredicted RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 HS1BP3Q53T59 392 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 H2AFVQ71UI9 128 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 TP53I13Q8NBR0 393 aaPredicted RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 ZNF548Q8NEK5 533 aaPredicted RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
DDR1-234ENST00000424544 DONSONQ9NYP3 566 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 SALL4Q9UJQ4 1053 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 PCDHA13Q9Y5I0 950 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 PTPRQQ9UMZ3 2332 aa16.34■□□□□ 0.21
DDR1-234ENST00000424544 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 NEMP1O14524 444 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 TOR1BO14657 336 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 TPP1O14773 563 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 BUB1BO60566 1050 aaPredicted RBP16.33■□□□□ 0.2
DDR1-234ENST00000424544 PRAMEF11O60813 436 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 MMP20O60882 483 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 TM7SF2O76062 418 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 MYF5P13349 255 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 IGFALSP35858 605 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 CSNK1DP48730 415 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 RHOAP61586 193 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 UGP2Q16851 508 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 ERMARDQ5T6L9 678 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 SNIP1Q8TAD8 396 aaKnown RBP16.33■□□□□ 0.2
DDR1-234ENST00000424544 TBATAQ96M53 351 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 PEBP4Q96S96 227 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 SLC39A8Q9C0K1 460 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 SUV39H2Q9H5I1 410 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 MBNL1Q9NR56 388 aaKnown RBP16.33■□□□□ 0.2
DDR1-234ENST00000424544 INTUQ9ULD6 942 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 ADGRG1Q9Y653 693 aa16.33■□□□□ 0.2
DDR1-234ENST00000424544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDR1-234ENST00000424544 BPTFQ12830 3046 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 GCATO75600 419 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 ALPPL2P10696 532 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms