RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 NPY2RP49146 381 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
PTPRN-204ENST00000423636 TIFABQ6ZNK6 161 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 TRIM42Q8IWZ5 723 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 DCP1BQ8IZD4 617 aaKnown RBP12.02□□□□□ -0.49
PTPRN-204ENST00000423636 TMEM151AQ8N4L1 468 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 OR13J1Q8NGT2 312 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 RCN3Q96D15 328 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 NAF1Q96HR8 494 aaKnown RBP12.02□□□□□ -0.49
PTPRN-204ENST00000423636 CDH19Q9H159 772 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 OSBPL2Q9H1P3 480 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 CCDC167Q9P0B6 97 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 GON4LQ3T8J9 2241 aa12.02□□□□□ -0.49
PTPRN-204ENST00000423636 UNCXA6NJT0 531 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 OR1I1O60431 355 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 ANXA9O76027 345 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 KLKB1P03952 638 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 SERPINA6P08185 405 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 MMP2P08253 660 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 SERPINH1P50454 418 aaKnown RBP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 COPAP53621 1224 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 INHBEP58166 350 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 RAB10P61026 200 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 ATXN7L2Q5T6C5 722 aaPredicted RBP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 RANBP10Q6VN20 620 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 IL12RB2Q99665 862 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 NAT9Q9BTE0 207 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 RHOJQ9H4E5 214 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 PIF1Q9H611 641 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 A0A088AWK7 358 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 TXNDC9O14530 226 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 SEC24AO95486 1093 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 PEX11BO96011 259 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 GNAZP19086 355 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 TM4SF4P48230 202 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 CD151P48509 253 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 COG7P83436 770 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 LHX8Q68G74 356 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 LSMEM2Q8N112 164 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 DPF3Q92784 378 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 FCRL5Q96RD9 977 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 HAPLN3Q96S86 360 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 KIFC1Q9BW19 673 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 C1QTNF1Q9BXJ1 281 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 ILKAPQ9H0C8 392 aaPredicted RBP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 FAM124BQ9H5Z6 455 aaPredicted RBP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 OXSMQ9NWU1 459 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 BTRCQ9Y297 605 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 KLF11O14901 512 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 BIRC5O15392 142 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 TIMM44O43615 452 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 PRAMEF12O95522 483 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 DSC1Q08554 894 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 MAPRE1Q15691 268 aaKnown RBP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 FSCBQ5H9T9 825 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 RABGAP1LQ5R372 815 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 TMPRSS6Q8IU80 811 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 LPCAT1Q8NF37 534 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 GPR22Q99680 433 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 UPF3AQ9H1J1 476 aaKnown RBP12.01□□□□□ -0.49
PTPRN-204ENST00000423636 CXorf56Q9H5V9 222 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 LNPEPQ9UIQ6 1025 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 SPO11Q9Y5K1 396 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
PTPRN-204ENST00000423636 SCN5AQ14524 2016 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 MOXD2PA6NHM9 499 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 GOT2P00505 430 aaKnown RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 GALTP07902 379 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 GSTA2P09210 222 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 PMLP29590 882 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 HCAR3P49019 387 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 GEMP55040 296 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 TBL3Q12788 808 aaKnown RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 TWF1Q12792 350 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 RALGDSQ12967 914 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 DEFB115Q30KQ5 88 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 SDCCAG8Q86SQ7 713 aaPredicted RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 CDRT15Q96T59 188 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 SLC24A3Q9HC58 644 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 NCKIPSDQ9NZQ3 722 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 TLR6Q9Y2C9 796 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 CCDC162PA2VCL2 907 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 CIB2O75838 187 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 YBX1P67809 324 aaKnown RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 CREB5Q02930 508 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 ASPHQ12797 758 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 KLF10Q13118 480 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 SLC12A1Q13621 1099 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 COL9A2Q14055 689 aaPredicted RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 PFKFB4Q16877 469 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 MANEALQ5VSG8 457 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 SEL1L3Q68CR1 1132 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 TLDC1Q6P9B6 456 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 RNF111Q6ZNA4 994 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 DNAJC9Q8WXX5 260 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 CASD1Q96PB1 797 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms