RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 PREBQ9HCU5 417 aa18.92■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3DA0A087WVF3 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3IA0A087WXS9 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3EA0A087X179 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3KA0A087X1G2 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 A0A1W2PQ67 120 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TTC24A2A3L6 582 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 BCLAF3A2AJT9 711 aaKnown RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3FA6NER0 549 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3LB9A6J9 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 H7C0C1 242 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TRAFD1O14545 582 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 GJB3O75712 270 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 ZNF189O75820 626 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 HLA-DQB2P05538 268 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3HP0C7X1 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TIMP2P16035 220 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 ATP5OP48047 213 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 CCR5P51681 352 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 EIF3EP60228 445 aaKnown RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 ZBTB17Q13105 803 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 WDR45BQ5MNZ6 344 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 LYSMD4Q5XG99 296 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 KIAA0895LQ68EN5 471 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3GQ6DHY5 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3CQ6IPX1 549 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 B4GALNT4Q76KP1 1039 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 TBC1D3Q8IZP1 549 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-214ENST00000423251 ARRDC2Q8TBH0 407 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 HTR3CQ8WXA8 447 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 DNASE2BQ8WZ79 361 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 SPOCK2Q92563 424 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 ECHDC3Q96DC8 303 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 NSMCE3Q96MG7 304 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 HSPA12BQ96MM6 686 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 VAT1Q99536 393 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 FERMT1Q9BQL6 677 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 ANGPTL2Q9UKU9 493 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 NUMA1Q14980 2115 aa18.91■□□□□ 0.62
MCF2L-214ENST00000423251 FAM47DPA6NHR8 397 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 HTRA2O43464 458 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-214ENST00000423251 SOCS5O75159 536 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 RBP3P10745 1247 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 PTPN3P26045 913 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 POLR2LP62875 67 aaKnown RBP18.9■□□□□ 0.62
MCF2L-214ENST00000423251 CFAP58Q5T655 872 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 CYP2U1Q7Z449 544 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 SLC35F6Q8N357 371 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 TEKT5Q96M29 485 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 FRMD8P1Q9BZ68 369 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-214ENST00000423251 SEPT10Q9P0V9 454 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-214ENST00000423251 PCDHGC4Q9Y5F7 938 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 FADS3Q9Y5Q0 445 aa18.9■□□□□ 0.62
MCF2L-214ENST00000423251 TNRC6BQ9UPQ9 1833 aaKnown RBP18.89■□□□□ 0.61
MCF2L-214ENST00000423251 TCRBV7S2A1N4TA0A589 114 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 LNP1A1A4G5 178 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 ENC1O14682 589 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 AREL1O15033 823 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 TSPAN6O43657 245 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 FSBPO95073 299 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 KCNK5O95279 499 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 HOXD12P35452 270 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 DSC2Q02487 901 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 NIPAL4Q0D2K0 466 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 WASHC5Q12768 1159 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 UGP2Q16851 508 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 PSAPL1Q6NUJ1 521 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 DARS2Q6PI48 645 aaKnown RBP18.89■□□□□ 0.61
MCF2L-214ENST00000423251 ARMCX6Q7L4S7 300 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 TRIM69Q86WT6 500 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 SYT12Q8IV01 421 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 CDKL3Q8IVW4 592 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-214ENST00000423251 BIRC7Q96CA5 298 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 FEM1CQ96JP0 617 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 PBKQ96KB5 322 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 AGAP3Q96P47 875 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 PILRBQ9UKJ0 227 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 TRHDEQ9UKU6 1024 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 TTLL3Q9Y4R7 772 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 CEP192Q8TEP8 1941 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 USP24Q9UPU5 2620 aa18.89■□□□□ 0.61
MCF2L-214ENST00000423251 MEI4A8MW99 385 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 IGHV4-34P06331 123 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 SERPINF2P08697 491 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 XPAP23025 273 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-214ENST00000423251 ITPKAP23677 461 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 RBL1P28749 1068 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 NUDT1P36639 197 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 ABL2P42684 1182 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 PEAR1Q5VY43 1037 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-214ENST00000423251 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 RGL4Q8IZJ4 473 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 SLC35B2Q8TB61 432 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 MAIP1Q8WWC4 291 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 PIGKQ92643 395 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 CEP41Q9BYV8 373 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 SLC25A51Q9H1U9 297 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 USP29Q9HBJ7 922 aa18.88■□□□□ 0.61
MCF2L-214ENST00000423251 GLOD4Q9HC38 313 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms