RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 TMC7Q7Z402 723 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 SCUBE1Q8IWY4 988 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 LMNTD2Q8IXW0 634 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 MAPK15Q8TD08 544 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 ZNF296Q8WUU4 475 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 HEXDCQ8WVB3 486 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 TSPAN17Q96FV3 270 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 ZNF512Q96ME7 567 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 IGSF5Q9NSI5 407 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 MUSKO15146 869 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 HDAC3O15379 428 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 PIGNO95427 931 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 FGF1P05230 155 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 MPSTP25325 297 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 MAP2K2P36507 400 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 SLC11A2P49281 568 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 LAMB3Q13751 1172 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 SLC14A2Q15849 920 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 SPATA6LQ8N4H0 392 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 STON2Q8WXE9 905 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 PEX13Q92968 403 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 HDAC10Q969S8 669 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 CMTM5Q96DZ9 223 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 IFT43Q96FT9 208 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 FAM161BQ96MY7 647 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 ANKRD27Q96NW4 1050 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 NACA2Q9H009 215 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 ZNF840PA6NDX5 716 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 H0Y3Z8 333 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 RPL17P18621 184 aaKnown RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 NUMBP49757 651 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 COPAP53621 1224 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 CDH4P55283 916 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 PRAMEP78395 509 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 GNA12Q03113 381 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 ACVR1Q04771 509 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 FAM83EQ2M2I3 478 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 HECTD3Q5T447 861 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 TLDC1Q6P9B6 456 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 PTAR1Q7Z6K3 402 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-202ENST00000422785 OR6P1Q8NGX9 317 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 AGR3Q8TD06 166 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 MOCOSQ96EN8 888 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 NDNQ99608 321 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 OLFM1Q99784 485 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 CHD5Q8TDI0 1954 aa13.88□□□□□ -0.19
CDCA3-202ENST00000422785 A0A0D9SEW6 157 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 F8W8V4 182 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 SLCO1B7G3V0H7 640 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 GJB3O75712 270 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 TFEBP19484 476 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 PRDX6P30041 224 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 ARSDP51689 593 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 DNAJB13P59910 316 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 SEL1L3Q68CR1 1132 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 NET1Q7Z628 596 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 ULK2Q8IYT8 1036 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 LSMEM2Q8N112 164 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 THTPAQ9BU02 230 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 TCF7L2Q9NQB0 619 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 MAN1C1Q9NR34 630 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 VTI1BQ9UEU0 232 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 ZFP37Q9Y6Q3 630 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 H3BNC9 293 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 NPHS1O60500 1241 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 SNUPNO95149 360 aaKnown RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 GJB5O95377 273 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 PARNO95453 639 aaKnown RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 S1PR4O95977 384 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 GLDCP23378 1020 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 CCR10P46092 362 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 ILF2Q12905 390 aaKnown RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 AGAP9Q5VTM2 703 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 BBS5Q8N3I7 341 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 PLD4Q96BZ4 506 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 VN1R3Q9BXE9 311 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 ACSS2Q9NR19 701 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
CDCA3-202ENST00000422785 VWA7Q9Y334 891 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
CDCA3-202ENST00000422785 TANC1Q9C0D5 1861 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 E9PBE3 544 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 COCHO43405 550 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 DCXO43602 365 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 KLHL41O60662 606 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 PSMG1O95456 288 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 SERPINF2P08697 491 aa13.86□□□□□ -0.19
CDCA3-202ENST00000422785 LTA4HP09960 611 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms