RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 C5orf60A6NFR6 353 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 LAMTOR5O43504 91 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ANXA9O76027 345 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 APBB3O95704 486 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 EGFP01133 1207 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ITGAVP06756 1048 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 SRCP12931 536 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 TCF4P15884 667 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 C5AR1P21730 350 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 MZF1P28698 734 aaPredicted RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 AVPR2P30518 371 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CASQ1P31415 396 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CHRNA3P32297 505 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 SGSHP51688 502 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ARF5P84085 180 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CDK16Q00536 496 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CKAP4Q07065 602 aaKnown RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 ZNF235Q14590 738 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 PRKD1Q15139 912 aaPredicted RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 DLG2Q15700 870 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CYP1B1Q16678 543 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ATP13A4Q4VNC1 1196 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 FNDC3BQ53EP0 1204 aaKnown RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 TEX44Q53QW1 395 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 RAB6CQ53S08 254 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CARD16Q5EG05 197 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 BRAT1Q6PJG6 821 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ZC3H14Q6PJT7 736 aaKnown RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 SLC36A4Q6YBV0 504 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 C1orf210Q8IVY1 113 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 CNPY4Q8N129 248 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 NAT16Q8N8M0 369 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 ATP11CQ8NB49 1132 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 MNS1Q8NEH6 495 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ATL2Q8NHH9 583 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 FRS2Q8WU20 508 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 NELL1Q92832 810 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 SLCO2A1Q92959 643 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 FAM131CQ96AQ9 280 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 HMCESQ96FZ2 354 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 MYO19Q96H55 970 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 QKIQ96PU8 341 aaKnown RBP eCLIP7.79□□□□□ -1.166e-33■■■□□ 18.8
RBM39-209ENST00000416529 NUDCD1Q96RS6 583 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 OSBPL9Q96SU4 736 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 MGME1Q9BQP7 344 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 HEPHQ9BQS7 1158 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 SPON2Q9BUD6 331 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 RAB6CQ9H0N0 254 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 RSPH9Q9H1X1 276 aaPredicted RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 GPATCH2LQ9NWQ4 482 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 TRMT1Q9NXH9 659 aaKnown RBP7.79□□□□□ -1.16
RBM39-209ENST00000416529 CLEC4EQ9ULY5 219 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 PYCARDQ9ULZ3 195 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 COL4A3Q01955 1670 aa7.79□□□□□ -1.16
RBM39-209ENST00000416529 ACACBO00763 2458 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 TSPAN11A1L157 253 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 DFFAO00273 331 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 TOR1BO14657 336 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 AP1G1O43747 822 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 ZNF500O60304 480 aaPredicted RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 CEP104O60308 925 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 FOXD2O60548 495 aaPredicted RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 GCATO75600 419 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 GAS8O95995 478 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 PDGFBP01127 241 aaPredicted RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 FGGP02679 453 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 SERPINF2P08697 491 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 CD48P09326 243 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 RBP3P10745 1247 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 CCNB1P14635 433 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 HOXB2P14652 356 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 CR2P20023 1033 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 GJC1P36383 396 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 FDFT1P37268 417 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 TNNT3P45378 269 aaPredicted RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 MMP13P45452 471 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 SOX9P48436 509 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 RHOAP61586 193 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 KDSRQ06136 332 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 LAMB3Q13751 1172 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 PRPSAP1Q14558 356 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 WHAMMP3Q1A5X7 153 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 TMEM215Q68D42 235 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 ZNF776Q68DI1 518 aaPredicted RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 CWF19L1Q69YN2 538 aaKnown RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 C22orf39Q6P5X5 142 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 ZNF572Q7Z3I7 529 aaPredicted RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 RABEPKQ7Z6M1 372 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 ZNF354CQ86Y25 554 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 KLHDC8BQ8IXV7 354 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 APCDD1Q8J025 514 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 NPWQ8N729 165 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 DTWD2Q8NBA8 298 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 TXNDC5Q8NBS9 432 aaKnown RBP7.78□□□□□ -1.16
RBM39-209ENST00000416529 CCNYQ8ND76 341 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 TSTD1Q8NFU3 115 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 OR7D4Q8NG98 312 aa7.78□□□□□ -1.16
RBM39-209ENST00000416529 RPLP0P6Q8NHW5 317 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms