RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 PLEKP08567 350 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 ETFBP38117 255 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 DNA2P51530 1060 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 CCNHP51946 323 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 ZNF143P52747 638 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 ADKP55263 362 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 GSCP56915 257 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 PFN3P60673 137 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 NFKB2Q00653 900 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 SLC20A2Q08357 652 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 SRSF6Q13247 344 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 SGCGQ13326 291 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 KIF26BQ2KJY2 2108 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 PRRT3Q5FWE3 981 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 ZNF783Q6ZMS7 281 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 MON1BQ7L1V2 547 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 B3GNT8Q7Z7M8 397 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 ZNF354CQ86Y25 554 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 PHACTR4Q8IZ21 702 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 CPLX3Q8WVH0 158 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 BTN2A2Q8WVV5 523 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 NAT6Q93015 286 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 IQCDQ96DY2 449 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 MCEEQ96PE7 176 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 CNPY3Q9BT09 278 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 RETREG1Q9H6L5 497 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 IL17BQ9UHF5 180 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 BZW2Q9Y6E2 419 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-202ENST00000415886 IGLV3-10A0A075B6K4 115 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 NTN3O00634 580 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 ZMPSTE24O75844 475 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 FTLP02792 175 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 CELA2BP08218 269 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 GZMAP12544 262 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 SKILP12757 684 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 RHOQP17081 205 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 SLC5A2P31639 672 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 GKP32189 559 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 IGFALSP35858 605 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 RPIAP49247 311 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 ARF5P84085 180 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 TGIF1Q15583 401 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 CARD16Q5EG05 197 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 EFHC2Q5JST6 749 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 BNIPLQ7Z465 357 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 PCDH20Q8N6Y1 951 aaKnown RBP13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 WDR48Q8TAF3 677 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 CENPIQ92674 756 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 EXTL1Q92935 676 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 GLMNQ92990 594 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 LIN37Q96GY3 246 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 TM6SF2Q9BZW4 377 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 CEP44Q9C0F1 390 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 CLPBQ9H078 707 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 EPB41L5Q9HCM4 733 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 ATP13A1Q9HD20 1204 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 PADI4Q9UM07 663 aa13.4□□□□□ -0.26
CTHRC1-202ENST00000415886 LMO7DNF2Z398 122 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 NEMP1O14524 444 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TERTO14746 1132 aaKnown RBP13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 PLD2O14939 933 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 YY2O15391 372 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TSPAN6O43657 245 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 CREB3O43889 395 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 RNF8O76064 485 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 ANXA6P08133 673 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 HGFP14210 728 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TSHRP16473 764 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 PSMA2P25787 234 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 UGT1A5P35504 534 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 THOP1P52888 689 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 HDAC4P56524 1084 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 RPL7AP62424 266 aaKnown RBP13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 GNA12Q03113 381 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TCEA2Q15560 299 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 NFKBIBQ15653 356 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TDRD12Q587J7 1177 aaKnown RBP13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 FIGNQ5HY92 759 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 USP53Q70EK8 1073 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 ZNF571Q7Z3V5 609 aaPredicted RBP13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 JAMLQ86YT9 394 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 DENND6BQ8NEG7 585 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 NTAN1Q96AB6 310 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 TRIM11Q96F44 468 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 FOXP3Q9BZS1 431 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 SLC13A1Q9BZW2 595 aa13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
CTHRC1-202ENST00000415886 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms