RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 MARVELD3Q96A59 401 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 CCDC124Q96CT7 223 aaKnown RBP20.58■□□□□ 0.88
AP1S3-205ENST00000415298 TMEM246Q9BRR3 403 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 PRMT7Q9NVM4 692 aaPredicted RBP20.58■□□□□ 0.88
AP1S3-205ENST00000415298 ARHGEF37A1IGU5 675 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 AURKAO14965 403 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 RETP07949 1114 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 HOXA11P31270 313 aaPredicted RBP20.57■□□□□ 0.88
AP1S3-205ENST00000415298 TRIM23P36406 574 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 OPRL1P41146 370 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 SLC25A3Q00325 362 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 MGAT3Q09327 533 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 TMEM26Q6ZUK4 368 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 TDRPQ86YL5 185 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 FLCNQ8NFG4 579 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 PTPRHQ9HD43 1115 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CD93Q9NPY3 652 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CDH22Q9UJ99 828 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 PTBP2Q9UKA9 531 aaKnown RBP20.57■□□□□ 0.88
AP1S3-205ENST00000415298 HCN4Q9Y3Q4 1203 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CLDN3O15551 220 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CAPNS1P04632 268 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 H2AFZP0C0S5 128 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CKBP12277 381 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 NCAM1P13591 858 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CHRNB2P17787 502 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 EN2P19622 333 aaPredicted RBP20.57■□□□□ 0.88
AP1S3-205ENST00000415298 GARTP22102 1010 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 MAP4P27816 1152 aaKnown RBP20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CASP3P42574 277 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 GPLD1P80108 840 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CDC42EP1Q00587 391 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 H2AFVQ71UI9 128 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CATSPER4Q7RTX7 472 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 ARMC8Q8IUR7 673 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CCNYL1Q8N7R7 359 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 XXYLT1Q8NBI6 393 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 FAM213AQ9BRX8 229 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 CCDC106Q9BWC9 280 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 AGO3Q9H9G7 860 aaKnown RBP20.57■□□□□ 0.88
AP1S3-205ENST00000415298 SSU72Q9NP77 194 aaKnown RBP20.57■□□□□ 0.88
AP1S3-205ENST00000415298 KCNK4Q9NYG8 393 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
AP1S3-205ENST00000415298 MEI4A8MW99 385 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 FAM25AB3EWG3 89 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 FAM25CB3EWG5 89 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 FAM25GB3EWG6 89 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 TOM1L1O75674 476 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 RFPL2O75678 378 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 ALDH1A2O94788 518 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 ADRB2P07550 413 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 ADRA1DP25100 572 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 EIF3EP60228 445 aaKnown RBP20.56■□□□□ 0.88
AP1S3-205ENST00000415298 OSTNP61366 133 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 S100A12P80511 92 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 MRPS15P82914 257 aaKnown RBP20.56■□□□□ 0.88
AP1S3-205ENST00000415298 NFIL3Q16649 462 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 FAM187BQ17R55 369 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 ZPBP2Q6X784 338 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 SLC9A9Q8IVB4 645 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.56■□□□□ 0.88
AP1S3-205ENST00000415298 PIK3R3Q92569 461 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 NPLQ9BXD5 320 aaPredicted RBP20.56■□□□□ 0.88
AP1S3-205ENST00000415298 RIMS3Q9UJD0 308 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 ANAPC5Q9UJX4 755 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 TRPV2Q9Y5S1 764 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 A0A0B4J269 797 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 H0YJX3 145 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 I3L4J1 428 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 OR7A10O76100 309 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 MFN2O95140 757 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 CD4P01730 458 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 COILP38432 576 aaPredicted RBP20.56■□□□□ 0.88
AP1S3-205ENST00000415298 TNFSF9P41273 254 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 IFITM3Q01628 133 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 TRIM60Q495X7 471 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 C12orf56Q8IXR9 622 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 FIBCD1Q8N539 461 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 FAM84AQ96KN4 292 aa20.56■□□□□ 0.88
AP1S3-205ENST00000415298 M0QZ92 97 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 IL1BP01584 269 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 PROZP22891 400 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 DNAJB2P25686 324 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 WNT7BP56706 349 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
AP1S3-205ENST00000415298 HERC3Q15034 1050 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 CARTPTQ16568 116 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 TMEM192Q8IY95 271 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 SLC44A1Q8WWI5 657 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 OPALINQ96PE5 141 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 MSTO1Q9BUK6 570 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 LSM14BQ9BX40 385 aaKnown RBP20.55■□□□□ 0.88
AP1S3-205ENST00000415298 PDZD7Q9H5P4 517 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 PARVAQ9NVD7 372 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 SIRT5Q9NXA8 310 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 DNMT3LQ9UJW3 386 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 ZNF229Q9UJW7 825 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 MUSKO15146 869 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 TLE2Q04725 743 aa20.55■□□□□ 0.88
AP1S3-205ENST00000415298 NME3Q13232 169 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms