RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ARMC3Q5W041 872 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 CCDC70Q6NSX1 233 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 LRRC8BQ6P9F7 803 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 GDPD4Q6W3E5 623 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 LINC00523Q86TU6 105 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 OR2T3Q8NH03 318 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 FBXO25Q8TCJ0 367 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■■□□□ 11.5
CNN3-203ENST00000415017 MCCC1Q96RQ3 725 aaPredicted RBP13.4□□□□□ -0.26
CNN3-203ENST00000415017 LYSMD1Q96S90 227 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 FOXP3Q9BZS1 431 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 TRIM31Q9BZY9 425 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 NEUROG2Q9H2A3 272 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 EPC1Q9H2F5 836 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 DPH5Q9H2P9 285 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
CNN3-203ENST00000415017 ATG13O75143 517 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 PMPCBO75439 489 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 PAPSS2O95340 614 aaPredicted RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 PIGNO95427 931 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 NDST3O95803 873 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 AGTP01019 485 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ALADP13716 330 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 HOXB2P14652 356 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 PSMA3P25788 255 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ITGB7P26010 798 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 WASP42768 502 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 RPS14P62263 151 aaKnown RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 SATB1Q01826 763 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 OLIG2Q13516 323 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 UBXN2BQ14CS0 331 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ZNF805Q5CZA5 627 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 SDE2Q6IQ49 451 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 CCNI2Q6ZMN8 369 aaPredicted RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
CNN3-203ENST00000415017 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ZCCHC9Q8N567 271 aaKnown RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 TBL1YQ9BQ87 522 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 HDAC8Q9BY41 377 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 MKRN2Q9H000 416 aaKnown RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 XAB2Q9HCS7 855 aaKnown RBP13.39□□□□□ -0.27
CNN3-203ENST00000415017 C2orf42Q9NWW7 574 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 ANAPC5Q9UJX4 755 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
CNN3-203ENST00000415017 CACNA1IQ9P0X4 2223 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 A0A0J9YYE9 177 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 ANKRD66B4E2M5 251 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 F5H423 210 aaPredicted RBP13.38□□□□□ -0.27
CNN3-203ENST00000415017 AP3B1O00203 1094 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 TRBC1P01850 177 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 FGF1P05230 155 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 UGT2B4P06133 528 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 TUBBP07437 444 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 AOC1P19801 751 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 CA4P22748 312 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 DRD3P35462 400 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 GRIA4P48058 902 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 CLCN5P51795 746 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 CALCOCO2Q13137 446 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 SPARCL1Q14515 664 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 NAA30Q147X3 362 aaPredicted RBP13.38□□□□□ -0.27
CNN3-203ENST00000415017 CDKN3Q16667 212 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 QPCTQ16769 361 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 SIRPB2Q5JXA9 342 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 BRAT1Q6PJG6 821 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 DSG4Q86SJ6 1040 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 RELL1Q8IUW5 271 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 CBARPQ8N350 705 aaPredicted RBP13.38□□□□□ -0.27
CNN3-203ENST00000415017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.38□□□□□ -0.27
CNN3-203ENST00000415017 IPMKQ8NFU5 416 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 PIP4K2CQ8TBX8 421 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 SIGLEC10Q96LC7 697 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 KLHL32Q96NJ5 620 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 C19orf43Q9BQ61 176 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 ZDHHC6Q9H6R6 413 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 PHTF1Q9UMS5 762 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 SCML1Q9UN30 329 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 CHKBQ9Y259 395 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 PCDHB9Q9Y5E1 797 aa13.38□□□□□ -0.27
CNN3-203ENST00000415017 C16orf96A6NNT2 1141 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 E7EVH7 732 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 AREL1O15033 823 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 SPINT1O43278 529 aa13.37□□□□□ -0.27
CNN3-203ENST00000415017 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms