RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ARHGAP6O43182 974 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CYP1A1P04798 512 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 ITGB2P05107 769 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 RPLP0P05388 317 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 MMEP08473 750 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 HGFP14210 728 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 MTIF2P46199 727 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CSRP3P50461 194 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 SUOXP51687 545 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 INHBCP55103 352 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 HDAC4P56524 1084 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CCL7P80098 99 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 SRSF6Q13247 344 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 C15orf59Q2T9L4 293 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 INO80DQ53TQ3 878 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 KLHDC7AQ5VTJ3 777 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 TAF3Q5VWG9 929 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 RWDD4Q6NW29 188 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CXorf40AQ8TE69 158 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 CPA5Q8WXQ8 436 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 TSACCQ96A04 125 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 NTAN1Q96AB6 310 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 TBC1D31Q96DN5 1066 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 GDAP1L1Q96MZ0 367 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 FOXP3Q9BZS1 431 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 KLC2Q9H0B6 622 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 EPB41L5Q9HCM4 733 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 METTL5Q9NRN9 209 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 GULP1Q9UBP9 304 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
LIMS2-210ENST00000413578 APPL1Q9UKG1 709 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 BOD1L1Q8NFC6 3051 aa12.29□□□□□ -0.44
LIMS2-210ENST00000413578 ZSCAN5CA6NGD5 496 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-210ENST00000413578 TMEM110-MUSTN1A8MSY1 372 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 F8VZ95 297 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 RASGRP1O95267 797 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 GJB6O95452 261 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 PLEKP08567 350 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-210ENST00000413578 ALPIP09923 528 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 LIPCP11150 499 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 UCHL3P15374 230 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 MMP8P22894 467 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 PTPN9P43378 593 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 NFATC3Q12968 1075 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 RAPGEF1Q13905 1077 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 NFATC4Q14934 902 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 LRRC14Q15048 493 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 VWA3BQ502W6 1294 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 NAA35Q5VZE5 725 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 OGFOD3Q6PK18 319 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 HID1Q8IV36 788 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 OR6C4Q8NGE1 309 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 JOSD2Q8TAC2 188 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 HCAR2Q8TDS4 363 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 RXFP2Q8WXD0 754 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 SCG3Q8WXD2 468 aaKnown RBP12.28□□□□□ -0.44
LIMS2-210ENST00000413578 EXTL1Q92935 676 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 SGF29Q96ES7 293 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 TMEM74Q96NL1 305 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 RBM15Q96T37 977 aaKnown RBP eCLIP12.28□□□□□ -0.44
LIMS2-210ENST00000413578 WRAP53Q9BUR4 548 aaKnown RBP12.28□□□□□ -0.44
LIMS2-210ENST00000413578 CPEB1Q9BZB8 566 aaKnown RBP12.28□□□□□ -0.44
LIMS2-210ENST00000413578 LRRN3Q9H3W5 708 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 SYNDIG1Q9H7V2 258 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 LHX3Q9UBR4 397 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 IL17BQ9UHF5 180 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 HPCAL4Q9UM19 191 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 GPR34Q9UPC5 381 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 COQ6Q9Y2Z9 468 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 LOXL2Q9Y4K0 774 aa12.28□□□□□ -0.44
LIMS2-210ENST00000413578 INSIG1O15503 277 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 BUB1O43683 1085 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 IGSF6O95976 241 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 PNLIPP16233 465 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 SDC4P31431 198 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 GSCP56915 257 aaPredicted RBP12.27□□□□□ -0.45
LIMS2-210ENST00000413578 SRP54P61011 504 aaKnown RBP12.27□□□□□ -0.45
LIMS2-210ENST00000413578 RHOAP61586 193 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 RAD51Q06609 339 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 ELP6Q0PNE2 266 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 PTP4A2Q12974 167 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 INPP5AQ14642 412 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 CDO1Q16878 200 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 ENPP7Q6UWV6 458 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 PRICKLE2Q7Z3G6 844 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 TMPRSS9Q7Z410 1059 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 GKN2Q86XP6 184 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 ZNF677Q86XU0 584 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 DTX1Q86Y01 620 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 SLITRK4Q8IW52 837 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms