RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TUBE1Q9UJT0 475 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 INTS6Q9UL03 887 aaKnown RBP4.69□□□□□ -1.66
BRCA1-204ENST00000412061 PADI1Q9ULC6 663 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 MYRFQ9Y2G1 1151 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 SALL3Q9BXA9 1300 aa4.69□□□□□ -1.66
BRCA1-204ENST00000412061 TRBC2A0A5B9 178 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 KRT87PA6NCN2 255 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 TTC36A6NLP5 189 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CAPN9O14815 690 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 SCAMP1O15126 338 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ADAMDEC1O15204 470 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ZBTB14O43829 449 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CAMTA2O94983 1202 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 C1RP00736 705 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 MBPP02686 304 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 GALTP07902 379 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CD72P21854 359 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 HOXC8P31273 242 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CXCR5P32302 372 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 COPB1P53618 953 aaKnown RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 PMS2P54278 862 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 YBEYP58557 167 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 TAS2R50P59544 299 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CSTF3Q12996 717 aaKnown RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CBX3Q13185 183 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ALKBH1Q13686 389 aaKnown RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ALCAMQ13740 583 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 BYSLQ13895 437 aaKnown RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 MORF4L2Q15014 288 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 AP5B1Q2VPB7 878 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CRY2Q49AN0 593 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 IGSF11Q5DX21 431 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ABRAXAS1Q6UWZ7 409 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 SERPINA13PQ6UXR4 307 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 NAPRTQ6XQN6 538 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 FAM185AQ8N0U4 392 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 SIX6OS1Q8N1H7 587 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 LINC01465Q8N7H1 131 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 FIBINQ8TAL6 211 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 SEPT1Q8WYJ6 367 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 HSPH1Q92598 858 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 DGAT2Q96PD7 388 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ATP6V0BQ99437 205 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 PAFAH2Q99487 392 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 PRRX2Q99811 253 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 STRA6Q9BX79 667 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 RNF26Q9BY78 433 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 TOR3AQ9H497 397 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 MID1IP1Q9NPA3 183 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 NRIP3Q9NQ35 241 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ABHD10Q9NUJ1 306 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 MTMR4Q9NYA4 1195 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 CACNG4Q9UBN1 327 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 ANAPC2Q9UJX6 822 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
BRCA1-204ENST00000412061 COPG1Q9Y678 874 aaKnown RBP4.68□□□□□ -1.66
BRCA1-204ENST00000412061 NPIPB13A6NJU9 1138 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NPIPB5A8MRT5 1133 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CDRT15L2A8MXV6 281 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NPIPB4C9JG80 1138 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 DNM1LO00429 736 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 PSMD14O00487 310 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ZNF263O14978 683 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 MATN3O15232 486 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 PRPF4O43172 522 aaKnown RBP eCLIP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 STX6O43752 255 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 TADA2AO75478 443 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ALDOAP04075 364 aaKnown RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CHRM4P08173 479 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CYP4B1P13584 511 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 APEHP13798 732 aaKnown RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 INSRRP14616 1297 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 PTPN2P17706 415 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 FMO4P31512 558 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 SLC8A1P32418 973 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 RFC1P35251 1148 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 MTHFRP42898 656 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CCR10P46092 362 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 MTNR1AP48039 350 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 TDO2P48775 406 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 RARRES1P49788 294 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NPY4RP50391 375 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 RPS6KA3P51812 740 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CYP4F2P78329 520 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 SIM1P81133 766 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 RUNX2Q13950 521 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 BAATQ14032 418 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ERCC6LQ2NKX8 1250 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 LETM2Q2VYF4 491 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ZSCAN23Q3MJ62 389 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NHSL2Q5HYW2 709 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 COLEC12Q5KU26 742 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CST9LP1Q5W188 147 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 HMBOX1Q6NT76 420 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CEP85Q6P2H3 762 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 TSSK4Q6SA08 328 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CLEC17AQ6ZS10 378 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms