RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 ABI3Q9P2A4 366 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 HEY2Q9UBP5 337 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 SEL1LQ9UBV2 794 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 RPS6KL1Q9Y6S9 549 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 CACNA1AO00555 2505 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 ERCC6Q03468 1493 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 FAM90A8PA6NJQ4 464 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 I6L893 689 aaPredicted RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 K7ENM7 598 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 EBAG9O00559 213 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 SEC14L5O43304 696 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 HNRNPCL1O60812 293 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 RGS11O94810 467 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 TFP02787 698 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 FAM90A13PP0C7W8 464 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 FAM90A24PP0C7X0 464 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 THPOP40225 353 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 CENPAP49450 140 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 CLCN3P51790 818 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 SRSF4Q08170 494 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 PDE1CQ14123 709 aaPredicted RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 GSTA3Q16772 222 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 C10orf25Q5T742 122 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 HAPLN4Q86UW8 402 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 SLC44A5Q8NCS7 719 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 ZNF548Q8NEK5 533 aaPredicted RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 SCFD2Q8WU76 684 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 ELMOD3Q96FG2 381 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 TIGD1Q96MW7 591 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 NUDT16L1Q9BRJ7 211 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 WDR83Q9BRX9 315 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 H2AFJQ9BTM1 129 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 MXD3Q9BW11 206 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 SPRTNQ9H040 489 aaPredicted RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 PRKRIP1Q9H875 184 aaPredicted RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 SPATS2LQ9NUQ6 558 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 TRNAU1APQ9NX07 287 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 FRMD4BQ9Y2L6 1034 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.85□□□□□ -1.95
CUL3-203ENST00000409096 FAM96BQ9Y3D0 163 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 LAS1LQ9Y4W2 734 aaKnown RBP2.85□□□□□ -1.95
CUL3-203ENST00000409096 A3GALT2U3KPV4 340 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 SNAPC4Q5SXM2 1469 aa2.85□□□□□ -1.95
CUL3-203ENST00000409096 TYW5A2RUC4 315 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 GTPBP1O00178 669 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 VILLO15195 856 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 NDUFB8O95169 186 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 CCNDBP1O95273 360 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 LCKP06239 509 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 TUBBP07437 444 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 KELP23276 732 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 SHMT1P34896 483 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 RFX5P48382 616 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 CSTF3Q12996 717 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 KLF9Q13886 244 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 INPP5JQ15735 1006 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 SOWAHAQ2M3V2 549 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 KIAA0930Q6ICG6 404 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 CTU1Q7Z7A3 348 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 UBE2Q1Q7Z7E8 422 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 PIP4P1Q86T03 277 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 ARHGAP12Q8IWW6 846 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 TMEM174Q8WUU8 243 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 INPP5DQ92835 1189 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 APOLD1Q96LR9 279 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 CMTM3Q96MX0 182 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 SRSF8Q9BRL6 282 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 NDRG3Q9UGV2 375 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 RGS12O14924 1447 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 LRRC53A6NM62 1247 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 EIF3CLB5ME19 914 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 FIBPO43427 364 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 LDB2O43679 373 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 PGM3O95394 542 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 CLTBP09497 229 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 TFPIP10646 304 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 KRT10P13645 584 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 ETFAP13804 333 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 CHRNB2P17787 502 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 PIGAP37287 484 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 AVPR1AP37288 418 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 COMPP49747 757 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 IRX6P78412 446 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 CCNG2Q16589 344 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 C2orf68Q2NKX9 166 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 ZNF284Q2VY69 593 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 KLHL35Q6PF15 583 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 SHC4Q6S5L8 630 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 C17orf53Q8N3J3 647 aaPredicted RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 ZCCHC9Q8N567 271 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 ARHGEF2Q92974 986 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 SMARCE1Q969G3 411 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 TMEM18Q96B42 140 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 RNF183Q96D59 192 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 FAM120BQ96EK7 910 aaKnown RBP2.84□□□□□ -1.95
CUL3-203ENST00000409096 C1orf74Q96LT6 269 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 SIN3AQ96ST3 1273 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 STRA6Q9BX79 667 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms