RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PEX5P50542 639 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CDH6P55285 790 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 PFN3P60673 137 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 DPYSQ14117 519 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 LRRC14Q15048 493 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CYTH1Q15438 398 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CA9Q16790 459 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 UGP2Q16851 508 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 PROX2Q3B8N5 592 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CCDC122Q5T0U0 273 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 ZCCHC8Q6NZY4 707 aaKnown RBP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 MACC1Q6ZN28 852 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 MAP7D3Q8IWC1 876 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 NDUFAF2Q8N183 169 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SLC22A18ASQ8N1D0 253 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SDR16C5Q8N3Y7 309 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 FSTL5Q8N475 847 aaPredicted RBP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 FAM181AQ8N9Y4 354 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNF548Q8NEK5 533 aaPredicted RBP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CPLX3Q8WVH0 158 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CTNNBL1Q8WYA6 563 aaPredicted RBP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 RFFLQ8WZ73 363 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 EXOC2Q96KP1 924 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 BMFQ96LC9 184 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 PSKH2Q96QS6 385 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 PEBP4Q96S96 227 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 IL12RB2Q99665 862 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 NUP85Q9BW27 656 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SLC13A1Q9BZW2 595 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SLC39A8Q9C0K1 460 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 FRYQ5TBA9 3013 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 POM121BA6NF01 834 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 J3KR12 359 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 AQP9O43315 295 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 SIGLEC6O43699 453 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 LZTS3O60299 673 aaPredicted RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 SOCS5O75159 536 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 PIGNO95427 931 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 GYPCP04921 128 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 KRT7P08729 469 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ALPIP09923 528 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 H2AFZP0C0S5 128 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 CKMT1AP12532 417 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 TIMP2P16035 220 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 JUNDP17535 347 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 HNRNPH3P31942 346 aaKnown RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 MMP12P39900 470 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 SSR1P43307 286 aaKnown RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 MTM1Q13496 603 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 FGL2Q14314 439 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 FZD2Q14332 565 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 AGERQ15109 404 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 PDK2Q15119 407 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ELOCQ15369 112 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 HES3Q5TGS1 186 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 TIGD7Q6NT04 549 aaPredicted RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 H2AFVQ71UI9 128 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ARHGAP12Q8IWW6 846 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ARFGAP1Q8N6T3 406 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 OR8K1Q8NGG5 319 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 WDR48Q8TAF3 677 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNF564Q8TBZ8 553 aaPredicted RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 HSPH1Q92598 858 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 NAT6Q93015 286 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 CENPTQ96BT3 561 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 GRAMD1AQ96CP6 724 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 CSPG4P5Q96PW8 444 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 DEPDC7Q96QD5 511 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 KLF6Q99612 283 aaPredicted RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 WRAP53Q9BUR4 548 aaKnown RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 NRSN2Q9GZP1 204 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 KLC2Q9H0B6 622 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 THAP2Q9H0W7 228 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 CWC15Q9P013 229 aaKnown RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 CTTNBP2NLQ9P2B4 639 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 APOBEC3BQ9UH17 382 aaKnown RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 SALL4Q9UJQ4 1053 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 CLCA2Q9UQC9 943 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ITM2BQ9Y287 266 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 ANKRD11Q6UB99 2663 aaPredicted RBP9.16□□□□□ -0.94
SNORD88A-201ENST00000408314 PTPRBP23467 1997 aa9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 A0A087X0T9 212 aa9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 SSU72P8A0A1W2PR75 194 aa9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 K7ESM1 405 aa9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 RNF103O00237 685 aa9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 CACNB4O00305 520 aaPredicted RBP9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 PDE2AO00408 941 aaPredicted RBP9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 RAD51BO15315 384 aa9.15□□□□□ -0.94
SNORD88A-201ENST00000408314 SPINT1O43278 529 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms