RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 MRPL46Q9H2W6 279 aaKnown RBP16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 XPR1Q9UBH6 696 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 SEPT3Q9UH03 358 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 RAP2CQ9Y3L5 183 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 YIPF1Q9Y548 306 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 LTBP2Q14767 1821 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 B2RBV5 119 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 AURKAO14965 403 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 LDB2O43679 373 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 PEX11AO75192 247 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 SERPINF2P08697 491 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 GRIA4P48058 902 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 OXCT1P55809 520 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 PRAMEP78395 509 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 TLE2Q04725 743 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 DLG1Q12959 904 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 TRIM60Q495X7 471 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 RBM20Q5T481 1227 aaKnown RBP16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 CHST9Q7L1S5 443 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 CILP2Q8IUL8 1156 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 MRPL57Q9BQC6 102 aaKnown RBP16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 HERC2P3Q9BVR0 1158 aa16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 ILKAPQ9H0C8 392 aaPredicted RBP16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 NOP53Q9NZM5 478 aaKnown RBP16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 UBA2Q9UBT2 640 aaPredicted RBP16.71■□□□□ 0.27
PIKFYVE-204ENST00000407449 A0A0D9SEW6 157 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 KDELR3O43731 214 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 STC2O76061 302 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 CORO1AP31146 461 aaKnown RBP16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 CPA2P48052 419 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 DSG1Q02413 1049 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 IL31Q6EBC2 164 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 EPGNQ6UW88 154 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 DENND2DQ9H6A0 471 aaPredicted RBP16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 EBF2Q9HAK2 575 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 RNPEPL1Q9HAU8 725 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 CYP4F11Q9HBI6 524 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 RIMKLBQ9ULI2 386 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 L3MBTL1Q9Y468 752 aa16.7■□□□□ 0.26
PIKFYVE-204ENST00000407449 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 DLX3O60479 287 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 DIAPH2O60879 1101 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 GJB3O75712 270 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 ALDH1A3P47895 512 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 ARSDP51689 593 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 RPS24P62847 133 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 KDSRQ06136 332 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 USP4Q13107 963 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 PLD1Q13393 1074 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 RFTN1Q14699 578 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 VEPH1Q14D04 833 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 DNAL1Q4LDG9 190 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 ZNF789Q5FWF6 425 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 SLC39A11Q8N1S5 342 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 OR52K2Q8NGK3 314 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 OR6P1Q8NGX9 317 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 TTC8Q8TAM2 541 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 STON2Q8WXE9 905 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 HDAC10Q969S8 669 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 PSKH2Q96QS6 385 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 CINPQ9BW66 212 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 COG4Q9H9E3 785 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 IGSF5Q9NSI5 407 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 PLXNA4Q9HCM2 1894 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 ANAPC1Q9H1A4 1944 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 A0A1B0GVM2 712 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 TCAF2A6NFQ2 919 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 MAGEC1O60732 1142 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 NDST3O95803 873 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 KLKB1P03952 638 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 RHOCP08134 193 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 GM2AP17900 193 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 MPSTP25325 297 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 PPP3CCP48454 512 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 PRKAA1Q13131 559 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 TAF12Q16514 161 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 FAM83EQ2M2I3 478 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 VWA5B1Q5TIE3 1220 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 HECTD2Q5U5R9 776 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 TMC7Q7Z402 723 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 SETD3Q86TU7 594 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 RBM15BQ8NDT2 890 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 HEXDCQ8WVB3 486 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 SCG3Q8WXD2 468 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 TRIB3Q96RU7 358 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 NDNQ99608 321 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 OLFM1Q99784 485 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 DDX50Q9BQ39 737 aaKnown RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 SPON2Q9BUD6 331 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 KLF16Q9BXK1 252 aaPredicted RBP16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 C1orf21Q9H246 121 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
PIKFYVE-204ENST00000407449 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.68■□□□□ 0.26
PIKFYVE-204ENST00000407449 NPHS1O60500 1241 aa16.68■□□□□ 0.26
PIKFYVE-204ENST00000407449 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms