RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PPHLN1Q8NEY8 458 aaKnown RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 ADCY4Q8NFM4 1077 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TSPAN14Q8NG11 270 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 CANT1Q8WVQ1 401 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 MCMBPQ9BTE3 642 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 ZNF385DQ9H6B1 395 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 CPA4Q9UI42 421 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TRHDEQ9UKU6 1024 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 A8MT66 165 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 PDHXO00330 501 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 NR5A2O00482 541 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TRIM38O00635 465 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 UBFD1O14562 309 aaKnown RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 MRASO14807 208 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 APOA4P06727 396 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 MYL3P08590 195 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 SCNN1AP37088 669 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 PNPLA4P41247 253 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 ARCN1P48444 511 aaKnown RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 ZFP1Q6P2D0 407 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 SLCO4A1Q96BD0 722 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 PABPC5Q96DU9 382 aaKnown RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 SOX17Q9H6I2 414 aaPredicted RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 VTA1Q9NP79 307 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 MID2Q9UJV3 735 aa12.07□□□□□ -0.48
RBM39-206ENST00000403542 TNS1Q9HBL0 1735 aaKnown RBP12.07□□□□□ -0.48
RBM39-206ENST00000403542 H2AFYO75367 372 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 POMCP01189 267 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 LRPAP1P30533 357 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 BRCC3P46736 316 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 SCNN1GP51170 649 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 VPS26BQ4G0F5 336 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 DUSP28Q4G0W2 176 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 TICAM1Q8IUC6 712 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 KATNBL1Q9H079 304 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 ATXN10Q9UBB4 475 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 VTI1BQ9UEU0 232 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 TSR3Q9UJK0 312 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 HEATR9A2RTY3 570 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 SOCS2O14508 198 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 NDST2P52849 883 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 IKBKEQ14164 716 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 MAP7D1Q3KQU3 841 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 HABP4Q5JVS0 413 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 ZBTB49Q6ZSB9 765 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 BNIPLQ7Z465 357 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 SPPL2CQ8IUH8 684 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 CPSF7Q8N684 471 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 DCBLD1Q8N8Z6 715 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 MYLPFQ96A32 169 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 CCDC28BQ9BUN5 200 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 MRPS26Q9BYN8 205 aaKnown RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 MAF1Q9H063 256 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 GLOD4Q9HC38 313 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 NT5MQ9NPB1 228 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 TMLHEQ9NVH6 421 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
RBM39-206ENST00000403542 BTRCQ9Y297 605 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 ANKRD6Q9Y2G4 727 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 LRRC37A2A6NM11 1700 aa12.06□□□□□ -0.48
RBM39-206ENST00000403542 ERI2A8K979 691 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 NCAM2O15394 837 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 XPOTO43592 962 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 STT3AP46977 705 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 ECT2LQ008S8 904 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 TBC1D25Q3MII6 688 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 HMBOX1Q6NT76 420 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 SCIMPQ6UWF3 145 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 CHST15Q7LFX5 561 aaPredicted RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 C14orf80Q86SX3 495 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 DDIASQ8IXT1 998 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 NPLOC4Q8TAT6 608 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 ASB9Q96DX5 294 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 IGSF5Q9NSI5 407 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 PTTG2Q9NZH5 202 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 TCAF1Q9Y4C2 921 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 PDE4DIPQ5VU43 2346 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 TRPC5OSA6NMA1 111 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 PAGE1O75459 146 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 B3GAT3O94766 335 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 OR4Q2P0C623 313 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 PRSS56P0CW18 603 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 CDK4P11802 303 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 ATP5F1P24539 256 aaPredicted RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 APLP1P51693 650 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 FOXA1P55317 472 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 FUT11Q495W5 492 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 SETD3Q86TU7 594 aaPredicted RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 OFCC1Q8IZS5 231 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 AHI1Q8N157 1196 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms