RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 TNRC6BQ9UPQ9 1833 aaKnown RBP17.55■□□□□ 0.4
HDAC11-202ENST00000402259 METTL12A8MUP2 240 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 AREL1O15033 823 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 TSPAN6O43657 245 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 GCATO75600 419 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 PGLSO95336 258 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 TIMP2P16035 220 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 NFKB1P19838 968 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 NFKBIAP25963 317 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 CD86P42081 329 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 DPP6P42658 865 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ABL2P42684 1182 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 NHLH1Q02575 133 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ELP6Q0PNE2 266 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 IHHQ14623 411 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ARMC12Q5T9G4 340 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ANKRD20A3Q5VUR7 823 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 PRR23BQ6ZRT6 265 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 TTC7BQ86TV6 843 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 PRPF39Q86UA1 669 aaKnown RBP17.54■□□□□ 0.4
HDAC11-202ENST00000402259 TRIM69Q86WT6 500 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 PRELID2Q8N945 189 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 MS4A14Q96JA4 679 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 TMEM121Q9BTD3 319 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 GBA3Q9H227 469 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 C10orf88Q9H8K7 445 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 FAM86C1Q9NVL1 165 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 RNF14Q9UBS8 474 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 SMG5Q9UPR3 1016 aaKnown RBP17.54■□□□□ 0.4
HDAC11-202ENST00000402259 ZNF148Q9UQR1 794 aa17.54■□□□□ 0.4
HDAC11-202ENST00000402259 CPP00450 1065 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 XPAP23025 273 aaPredicted RBP17.53■□□□□ 0.4
HDAC11-202ENST00000402259 CASQ1P31415 396 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 NUDT1P36639 197 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 CYP1B1Q16678 543 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 P3H1Q32P28 736 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 KIAA0895LQ68EN5 471 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 LAIR1Q6GTX8 287 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 ERAP2Q6P179 960 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 ZSWIM9Q86XI8 627 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 C12orf50Q8NA57 414 aaPredicted RBP17.53■□□□□ 0.4
HDAC11-202ENST00000402259 C6orf106Q9H6K1 298 aaPredicted RBP17.53■□□□□ 0.4
HDAC11-202ENST00000402259 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 PHTF1Q9UMS5 762 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 PPIL1Q9Y3C6 166 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 PCDHB9Q9Y5E1 797 aa17.53■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3DA0A087WVF3 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3IA0A087WXS9 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3EA0A087X179 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3KA0A087X1G2 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 GOLGA6L10A0A0M3HER8 536 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3FA6NER0 549 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3LB9A6J9 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 KIF2AO00139 706 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-202ENST00000402259 ZNF185O15231 689 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 SPINT1O43278 529 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 LATO43561 262 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 ANXA9O76027 345 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3HP0C7X1 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 MPP3Q13368 585 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TMEM52BQ4KMG9 183 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 SYCP2LQ5T4T6 812 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 LYSMD4Q5XG99 296 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3GQ6DHY5 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3CQ6IPX1 549 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 KIAA1161Q6NSJ0 714 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 SYT10Q6XYQ8 523 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 CREG2Q8IUH2 290 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 SLC41A1Q8IVJ1 513 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 KLHDC8BQ8IXV7 354 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TMEFF1Q8IYR6 380 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 TBC1D3Q8IZP1 549 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-202ENST00000402259 NDUFAF2Q8N183 169 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 PAF1Q8N7H5 531 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 FAM71DQ8N9W8 422 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 PIH1D2Q8WWB5 315 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 DNASE2BQ8WZ79 361 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 RBM15Q96T37 977 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDAC11-202ENST00000402259 FAM153AQ9UHL3 310 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-202ENST00000402259 PCDHGA5Q9Y5G8 931 aa17.52■□□□□ 0.4
HDAC11-202ENST00000402259 WDFY4Q6ZS81 3184 aa17.52■□□□□ 0.39
HDAC11-202ENST00000402259 TRPM6Q9BX84 2022 aa17.52■□□□□ 0.39
HDAC11-202ENST00000402259 RIOK3O14730 519 aaKnown RBP17.51■□□□□ 0.39
HDAC11-202ENST00000402259 EPN2O95208 641 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 PRLP01236 227 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 EPOP01588 193 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
HDAC11-202ENST00000402259 HOXD12P35452 270 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 MMP12P39900 470 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 GDF10P55107 478 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 LMNB2Q03252 620 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 SNX1Q13596 522 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 PRPSAP1Q14558 356 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 PARP6Q2NL67 630 aa17.51■□□□□ 0.39
HDAC11-202ENST00000402259 WDR45BQ5MNZ6 344 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms