RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 YIPF2Q9BWQ6 316 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 NMUR1Q9HB89 426 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 NME7Q9Y5B8 376 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 SNX13Q9Y5W8 968 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 TMEM233B4DJY2 109 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ALDOAP04075 364 aaKnown RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 URODP06132 367 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 RBP1P09455 135 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 FGFR3P22607 806 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 DDX39BQ13838 428 aaKnown RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 TMTC4Q5T4D3 741 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 CLEC6AQ6EIG7 209 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ELMOD1Q8N336 334 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ZNF398Q8TD17 642 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 SEMA6AQ9H2E6 1030 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 MTMR10Q9NXD2 777 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 MKL2Q9ULH7 1088 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 STAU1O95793 577 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 MYCLP1P12525 358 aaPredicted RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 COX4I1P13073 169 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CRABP2P29373 138 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 ACVRL1P37023 503 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CDK7P50613 346 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PPIDQ08752 370 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 MOGSQ13724 837 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 LBRQ14739 615 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 IYDQ6PHW0 289 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CACUL1Q86Y37 369 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 FAM156AQ8NDB6 213 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 NPAS2Q99743 824 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 IGSF9Q9P2J2 1179 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 SATB2Q9UPW6 733 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 HDAC3O15379 428 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 BIRC5O15392 142 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 MGEA5O60502 916 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 SERPINA6P08185 405 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PPARGP37231 505 aaPredicted RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 RAD51Q06609 339 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 UPP1Q16831 310 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PTPRNQ16849 979 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 MARK2Q7KZI7 788 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 TRIML2Q8N7C3 387 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PRKD2Q9BZL6 878 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 SLC45A1Q9Y2W3 748 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PCDHB9Q9Y5E1 797 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CRTAMO95727 393 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CYP2C18P33260 490 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 SLC1A2P43004 574 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 CDK18Q07002 472 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 FASTKQ14296 549 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 DNAJC1Q96KC8 554 aaKnown RBP13.59□□□□□ -0.23
SIRPA-203ENST00000400068 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 ZMYM5Q9UJ78 669 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
SIRPA-203ENST00000400068 MBLAC1A4D2B0 266 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 VPS26AO75436 327 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 GABBR2O75899 941 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 PRKCHP24723 683 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 NEK3P51956 506 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 HECTD3Q5T447 861 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 FUT10Q6P4F1 479 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 LRRC8DQ7L1W4 858 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 C7orf26Q96N11 449 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 LENG8Q96PV6 779 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 DRC3Q9H069 523 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 COPS7BQ9H9Q2 264 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 HCSTQ9UBK5 93 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 VWA7Q9Y334 891 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 MATN3O15232 486 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 PEX11AO75192 247 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 LRG1P02750 347 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 LRPAP1P30533 357 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 DSG1Q02413 1049 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 SLC18A2Q05940 514 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 LIPMQ5VYY2 423 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 OR4K2Q8NGD2 314 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 WDR60Q8WVS4 1066 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 KCTD13Q8WZ19 329 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 NR1H4Q96RI1 486 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 CDH19Q9H159 772 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 MOSPD1Q9UJG1 213 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 SIPA1L1O43166 1804 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 AHSGP02765 367 aa13.58□□□□□ -0.24
SIRPA-203ENST00000400068 LTA4HP09960 611 aaKnown RBP13.58□□□□□ -0.24
SIRPA-203ENST00000400068 TBCCQ15814 346 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms