RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 SEPHS2Q99611 448 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 NACA2Q9H009 215 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 TPK1Q9H3S4 243 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 NOL6Q9H6R4 1146 aaKnown RBP17.21■□□□□ 0.35
PTPRA-205ENST00000399903 SETD4Q9NVD3 440 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 OXSMQ9NWU1 459 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 CROTQ9UKG9 612 aa17.21■□□□□ 0.35
PTPRA-205ENST00000399903 CNOT11Q9UKZ1 510 aaKnown RBP17.21■□□□□ 0.35
PTPRA-205ENST00000399903 C2CD4BA6NLJ0 364 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 TMEM114B3SHH9 223 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 MYO1DO94832 1006 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 C22orf31O95567 290 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 GPR162Q16538 588 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 ABRAXAS1Q6UWZ7 409 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 CYP4V2Q6ZWL3 525 aaPredicted RBP17.21■□□□□ 0.34
PTPRA-205ENST00000399903 FAM35AQ86V20 835 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 CADM3Q8N126 398 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 DHRSXQ8N5I4 330 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 C7orf31Q8N865 590 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 ARNTL2Q8WYA1 636 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 ANKRD36BP1Q96IX9 119 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 GLT1D1Q96MS3 346 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 CPNE1Q99829 537 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 ERAP1Q9NZ08 941 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 XPR1Q9UBH6 696 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 ITGB1BP2Q9UKP3 347 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.34
PTPRA-205ENST00000399903 INPP4BO15327 924 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 HCRTO43612 131 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 ARF4P18085 180 aaPredicted RBP17.2■□□□□ 0.34
PTPRA-205ENST00000399903 TPSB2P20231 275 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 IL10P22301 178 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 GRTP1Q5TC63 336 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 LIPMQ5VYY2 423 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 DSG4Q86SJ6 1040 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 C14orf80Q86SX3 495 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 GPRC5AQ8NFJ5 357 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 RBBP8Q99708 897 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 C1orf50Q9BV19 199 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 CACNA2D2Q9NY47 1150 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 KLHL8Q9P2G9 620 aaPredicted RBP17.2■□□□□ 0.34
PTPRA-205ENST00000399903 OTOFQ9HC10 1997 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 HBP1O60381 514 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 SULT1C4O75897 302 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 GOT1P17174 413 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 MAGEA3P43357 314 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 ZBTB17Q13105 803 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 KIAA2013Q8IYS2 634 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 CNTD1Q8N815 330 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
PTPRA-205ENST00000399903 UBDO15205 165 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 TADA2AO75478 443 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 SNAP29O95721 258 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 GRM3Q14832 879 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 PPP4R4Q6NUP7 873 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 DCLRE1AQ6PJP8 1040 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 SGCDQ92629 289 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 VPS39Q96JC1 886 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 SLC45A3Q96JT2 553 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 NSMCE3Q96MG7 304 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 IGKV6-21A0A0C4DH24 114 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 NR5A2O00482 541 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 IDUAP35475 653 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 CERCAMQ5T4B2 595 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 PLPPR4Q7Z2D5 763 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 TTC30AQ86WT1 665 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 FAM131BQ86XD5 332 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 FZD8Q9H461 694 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 RAD21L1Q9H4I0 556 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 FBRSL1Q9HCM7 1045 aaKnown RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 IFT80Q9P2H3 777 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 SUCOQ9UBS9 1254 aaKnown RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 DHRS12A0PJE2 317 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 GCATO75600 419 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 MTHFD1P11586 935 aaKnown RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 FASP25445 335 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 CDH5P33151 784 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 POLR2IP36954 125 aaKnown RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 GSSP48637 474 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 POLD3Q15054 466 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-205ENST00000399903 IMPG1Q17R60 797 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 FUT11Q495W5 492 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 SLC41A1Q8IVJ1 513 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 TP53INP2Q8IXH6 220 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 CDHR5Q9HBB8 845 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 DTLQ9NZJ0 730 aa17.19■□□□□ 0.34
PTPRA-205ENST00000399903 PPEF2O14830 753 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 DYNC1LI2O43237 492 aaPredicted RBP17.18■□□□□ 0.34
PTPRA-205ENST00000399903 XYLBO75191 536 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CAPN15O75808 1086 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 NCK1P16333 377 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 TKTP29401 623 aaKnown RBP17.18■□□□□ 0.34
PTPRA-205ENST00000399903 ADAM17P78536 824 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms