RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 CASKIN2Q8WXE0 1202 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 LRIG1Q96JA1 1093 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 TM6SF2Q9BZW4 377 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 TRIM7Q9C029 511 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 NOL6Q9H6R4 1146 aaKnown RBP11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 GPATCH2LQ9NWQ4 482 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 AP4E1Q9UPM8 1137 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 SPEGQ15772 3267 aa11.96□□□□□ -0.49
SMIM11A-201ENST00000399292 NUMA1Q14980 2115 aa11.96□□□□□ -0.5
SMIM11A-201ENST00000399292 CEP295Q9C0D2 2601 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 MAP1BP46821 2468 aaKnown RBP11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 A0A1W2PQU0 124 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 A0A1W2PR77 199 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 PRAMEF26H0Y7S4 382 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 KRIT1O00522 736 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 FLRT2O43155 660 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 PCDHGA12O60330 932 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 MAGEC1O60732 1142 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 TRIM16O95361 564 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 GSRP00390 522 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 WNT1P04628 370 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 GYPCP04921 128 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 ITGB7P26010 798 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 CASP14P31944 242 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 CCT8P50990 548 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 NEK3P51956 506 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 NDST2P52849 883 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 RAD51Q06609 339 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 OVGP1Q12889 678 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 SERINC3Q13530 473 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 PIGHQ14442 188 aaPredicted RBP11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 CA9Q16790 459 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 BOLA3Q53S33 107 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 PRAMEF14Q5SWL7 426 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 LRRC69Q6ZNQ3 347 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 HORMAD1Q86X24 394 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 OR2AP1Q8NGE2 309 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 HMCESQ96FZ2 354 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 FEM1CQ96JP0 617 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 ELF4Q99607 663 aaPredicted RBP11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 TSPY26PQ9H489 355 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 ZDHHC6Q9H6R6 413 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 GDF3Q9NR23 364 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 PCOLCE2Q9UKZ9 415 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 ZNF232Q9UNY5 417 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 ASPMQ8IZT6 3477 aa11.95□□□□□ -0.5
SMIM11A-201ENST00000399292 USP24Q9UPU5 2620 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ADAMTS9Q9P2N4 1935 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 A0A087X0T9 212 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 A0A1B0GTQ1 180 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 SLC31A1O15431 190 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 CBFA2T3O75081 653 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 LRCH4O75427 683 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 TMCC1O94876 653 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 FURINP09958 794 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 FAM228BP0C875 321 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ADRB3P13945 408 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 GKP32189 559 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 PCK1P35558 622 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 HCAR3P49019 387 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ZNF135P52742 658 aaPredicted RBP11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 NXPH1P58417 271 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ZNF284Q2VY69 593 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ZNF805Q5CZA5 627 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 TBCELQ5QJ74 424 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 SPECC1LQ69YQ0 1117 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ALKBH5Q6P6C2 394 aaKnown RBP11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 RFX8Q6ZV50 586 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 IQCHQ86VS3 1027 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 OR6K2Q8NGY2 324 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 KLK6Q92876 244 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 RAB7BQ96AH8 199 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 GDAP1L1Q96MZ0 367 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 PEBP4Q96S96 227 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 CDC6Q99741 560 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 OSBPL1AQ9BXW6 950 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 KLC2Q9H0B6 622 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 THAP2Q9H0W7 228 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 LRRC19Q9H756 370 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 CACNA1EQ15878 2313 aa11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ASCC3Q8N3C0 2202 aaKnown RBP11.94□□□□□ -0.5
SMIM11A-201ENST00000399292 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 SERTM1A2A2V5 107 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 ARHGAP42A6NI28 874 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 ELOA3DA6NLF2 546 aaPredicted RBP11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 C16orf96A6NNT2 1141 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 POM121CA8CG34 1229 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 MYO1FO00160 1098 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 AP1G1O43747 822 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 IGSF6O95976 241 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 UGT2B4P06133 528 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 PRLRP16471 622 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 ERCC2P18074 760 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 AKT2P31751 481 aa11.93□□□□□ -0.5
SMIM11A-201ENST00000399292 HNRNPH3P31942 346 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms