RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 TREX1Q9NSU2 369 aa9.52□□□□□ -0.88
LINC00243-201ENST00000399196 UBA2Q9UBT2 640 aaPredicted RBP9.52□□□□□ -0.88
LINC00243-201ENST00000399196 ARL2BPQ9Y2Y0 163 aa9.52□□□□□ -0.88
LINC00243-201ENST00000399196 C5orf42Q9H799 3197 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 REV3LO60673 3130 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 CCDC195A0A1B0GUA6 201 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 LEFTY2O00292 366 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 AURKAO14965 403 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 KDELR3O43731 214 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 GREM1O60565 184 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 DDX6P26196 483 aaKnown RBP eCLIP9.52□□□□□ -0.89
LINC00243-201ENST00000399196 CNTFP26441 200 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 HOXA9P31269 272 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 MAGEA9P43362 315 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 RGRP47804 291 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 SCTRP47872 440 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 ERVK-21P61565 698 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 IRF9Q00978 393 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 NAB1Q13506 487 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TEAD2Q15562 447 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
LINC00243-201ENST00000399196 CNGA3Q16281 694 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TSNAXIP1Q2TAA8 658 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 GALNTL6Q49A17 601 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 HSF5Q4G112 596 aaPredicted RBP9.52□□□□□ -0.89
LINC00243-201ENST00000399196 ZCCHC23Q6ZST2 131 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 HTR3DQ70Z44 454 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 CMTM8Q8IZV2 173 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 SDR16C5Q8N3Y7 309 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TDRD5Q8NAT2 981 aaKnown RBP9.52□□□□□ -0.89
LINC00243-201ENST00000399196 LEMD2Q8NC56 503 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TCEAL4Q96EI5 215 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 CINPQ9BW66 212 aaPredicted RBP9.52□□□□□ -0.89
LINC00243-201ENST00000399196 KCNK13Q9HB14 408 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 PIDD1Q9HB75 910 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 ARNT2Q9HBZ2 717 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 VPS45Q9NRW7 570 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TMEM216Q9P0N5 145 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 SIRPGQ9P1W8 387 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 DNMT3BQ9UBC3 853 aaKnown RBP9.52□□□□□ -0.89
LINC00243-201ENST00000399196 CHKBQ9Y259 395 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TBC1D30Q9Y2I9 924 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 TCAF1Q9Y4C2 921 aa9.52□□□□□ -0.89
LINC00243-201ENST00000399196 FSBPO95073 299 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 LUC7L3O95232 432 aaKnown RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 VAPBO95292 243 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 AHSGP02765 367 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ATXN1LP0C7T5 689 aaKnown RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ARRB2P32121 409 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 MPP1Q00013 466 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ACTN3Q08043 901 aaPredicted RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 BST1Q10588 318 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 CTBP1Q13363 440 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 GRM3Q14832 879 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 N4BP2L1Q5TBK1 243 aaPredicted RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 GRTP1Q5TC63 336 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 TPGS1Q6ZTW0 290 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 MFN1Q8IWA4 741 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 BBS7Q8IWZ6 715 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 SH3RF2Q8TEC5 729 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 GRAMD1AQ96CP6 724 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 VPS39Q96JC1 886 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 SEMA3CQ99985 751 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 TASP1Q9H6P5 420 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 NPHS2Q9NP85 383 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 TXNDC16Q9P2K2 825 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 SEPT3Q9UH03 358 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 VPS28Q9UK41 221 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ARHGAP26Q9UNA1 814 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 SLC12A4Q9UP95 1085 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 KCTD3Q9Y597 815 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 HCFC2Q9Y5Z7 792 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 TRANK1O15050 2925 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 MTCL1Q9Y4B5 1905 aaKnown RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 RFXAPO00287 272 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 CCL22O00626 93 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 PLIN3O60664 434 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 CD160O95971 181 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 CYBBP04839 570 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 BPGMP07738 259 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 TYK2P29597 1187 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 EPHA5P54756 1037 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 PDE1BQ01064 536 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 MLLT1Q03111 559 aaPredicted RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 PCLAFQ15004 111 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 MPPE1Q53F39 396 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ZNF789Q5FWF6 425 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 FSCBQ5H9T9 825 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 CXorf57Q6NSI4 855 aaKnown RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 POTEHQ6S545 545 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ZNF783Q6ZMS7 281 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 GRASPQ7Z6J2 395 aaPredicted RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ZC3HC1Q86WB0 502 aaKnown RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 PPHLN1Q8NEY8 458 aaKnown RBP9.51□□□□□ -0.89
LINC00243-201ENST00000399196 ACMSDQ8TDX5 336 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 GDPD5Q8WTR4 605 aa9.51□□□□□ -0.89
LINC00243-201ENST00000399196 IFT43Q96FT9 208 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms