RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 PPP1R13LQ8WUF5 828 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 COG8Q96MW5 612 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 PPP1R10Q96QC0 940 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 MPHOSPH6Q99547 160 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 CXCL16Q9H2A7 254 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 SPON1Q9HCB6 807 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 DUS2Q9NX74 493 aaKnown RBP9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 ST14Q9Y5Y6 855 aa9.97□□□□□ -0.81
PTCHD4-202ENST00000398738 TMEM114B3SHH9 223 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 NR5A2O00482 541 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 UBDO15205 165 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 MAN1A2O60476 641 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 TADA2AO75478 443 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 EGFRP00533 1210 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 CDH3P22223 829 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 UBA1P22314 1058 aaKnown RBP9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 CLCN2P51788 898 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 OXCT1P55809 520 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 ENPEPQ07075 957 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 CSHL1Q14406 222 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 SURF1Q15526 300 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 ZBED5Q49AG3 693 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 CNSTQ6PJW8 725 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 LYSMD3Q7Z3D4 306 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 ETFBKMTQ8IXQ9 262 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 RYBPQ8N488 228 aaPredicted RBP9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 LPAR1Q92633 364 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 SEPHS2Q99611 448 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 ADI1Q9BV57 179 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 POMKQ9H5K3 350 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 RPF2Q9H7B2 306 aaKnown RBP9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 ZFYVE28Q9HCC9 887 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 TNFRSF12AQ9NP84 129 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 CACNA2D2Q9NY47 1150 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 OAZ3Q9UMX2 235 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 RBBP6Q7Z6E9 1792 aaKnown RBP9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 CENPFP49454 3210 aa9.96□□□□□ -0.81
PTCHD4-202ENST00000398738 A8MU76 341 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 J3QL48 77 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 SERPINB7O75635 380 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 MTHFD1P11586 935 aaKnown RBP9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 NCK1P16333 377 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 ATP6V1B2P21281 511 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 HOXD12P35452 270 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 SULT1E1P49888 294 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 C6orf183Q5T699 404 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 TMEM53Q6P2H8 277 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 CELF6Q96J87 481 aaKnown RBP9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 BCO2Q9BYV7 579 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 ADNPQ9H2P0 1102 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 PTGDR2Q9Y5Y4 395 aa9.96□□□□□ -0.82
PTCHD4-202ENST00000398738 SDHDO14521 159 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 INPP4BO15327 924 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SIAH2O43255 324 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 B4GALT4O60513 344 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SBK3P0C264 359 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 BCAP31P51572 246 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 CDH13P55290 713 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 YBX1P67809 324 aaKnown RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 STX5Q13190 355 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SEPT6Q14141 434 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TRIM16LQ309B1 348 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 HSDL1Q3SXM5 330 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 FBXO48Q5FWF7 155 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 HABP4Q5JVS0 413 aaKnown RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SHCBP1Q8NEM2 672 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DQX1Q8TE96 717 aaKnown RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 BORCS5Q969J3 196 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ELMO2Q96JJ3 720 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 HEPHQ9BQS7 1158 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 HIPK3Q9H422 1215 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SPAG4Q9NPE6 437 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 CROTQ9UKG9 612 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SNX10Q9Y5X0 201 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TMEM247A6NEH6 219 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 EI24O14681 340 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TNFRSF10BO14763 440 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SRP72O76094 671 aaKnown RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 MYCP01106 439 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 MPOP05164 745 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ZFXP17010 805 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 C1QTNF8P60827 252 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 PLIN5Q00G26 463 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 PFKPQ01813 784 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 GSTM4Q03013 218 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 PIGFQ07326 219 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DPYSQ14117 519 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TMEM132DQ14C87 1099 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 NHSL2Q5HYW2 709 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SPANXN3Q5MJ09 141 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 EFCAB12Q6NXP0 572 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 LCLAT1Q6UWP7 414 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ZYG11AQ6WRX3 759 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 CTU1Q7Z7A3 348 aaKnown RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 CEP97Q8IW35 865 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DEFB106AQ8N104 65 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TMCO5AQ8N6Q1 288 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 KDM1BQ8NB78 822 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms