RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 KRBA1A5PL33 1030 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 KPNA4O00629 521 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 DAB1O75553 588 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 BCAS2O75934 225 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 BEST1O76090 585 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 NFKB1P19838 968 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 CD68P34810 354 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 RPL34P49207 117 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 PCYT1AP49585 367 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 USP10Q14694 798 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 TRIM16LQ309B1 348 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 PTAR1Q7Z6K3 402 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 SETD3Q86TU7 594 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 TMEM151AQ8N4L1 468 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 CCNYL1Q8N7R7 359 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 PPP1R13LQ8WUF5 828 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 NDEL1Q9GZM8 345 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 PARVBQ9HBI1 364 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 KLK14Q9P0G3 267 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 NOX1Q9Y5S8 564 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 RNASEH2AO75792 299 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 JAK1P23458 1154 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 DCKP27707 260 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 PRKAA1Q13131 559 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 ANO4Q32M45 955 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 FBXO47Q5MNV8 452 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 SLC41A1Q8IVJ1 513 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 CPNE9Q8IYJ1 553 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 CRYBG2Q8N1P7 616 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 NPWQ8N729 165 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 GTF3C2Q8WUA4 911 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 TAMM41Q96BW9 452 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 C1QTNF1Q9BXJ1 281 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 ANKRD60Q9BZ19 345 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 NXF3Q9H4D5 531 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 CXorf21Q9HAI6 301 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 GOLGA2P5Q9HBQ8 144 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 MID2Q9UJV3 735 aa16.11■□□□□ 0.17
CHMP1A-201ENST00000397901 A0A1W2PPW3 197 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 TMX2-CTNND1H3BSU7 103 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 VAPBO95292 243 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 PTPN1P18031 435 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 CYP2B6P20813 491 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 GABRB3P28472 473 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 HOXA11P31270 313 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 KPNA1P52294 538 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 CSE1LP55060 971 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 ZBTB6Q15916 424 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 DCAF4L1Q3SXM0 396 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 LSMEM2Q8N112 164 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 CPSF7Q8N684 471 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 SLC7A14Q8TBB6 771 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 SLC10A4Q96EP9 437 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 NPY6RQ99463 290 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 OMDQ99983 421 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 ZNF385DQ9H6B1 395 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 FIS1Q9Y3D6 152 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 COPG1Q9Y678 874 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 FAM155AB1AL88 458 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 J3QRK9 145 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 RECQL4O94761 1208 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 NOS2P35228 1153 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 NSUN2Q08J23 767 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 KCNJ8Q15842 424 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 KCTD11Q693B1 232 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 ANKRD26P1Q6NSI1 321 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 FSTL5Q8N475 847 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 FBXL8Q96CD0 374 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 CTRCQ99895 268 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 FAM49AQ9H0Q0 323 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 EFCAB1Q9HAE3 211 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 ZBTB26Q9HCK0 441 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 VTA1Q9NP79 307 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 ADA2Q9NZK5 511 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 XPR1Q9UBH6 696 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 SNX10Q9Y5X0 201 aa16.1■□□□□ 0.17
CHMP1A-201ENST00000397901 TRIM64BA6NI03 449 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 I6L893 689 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SNAP91O60641 907 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 CABYRO75952 493 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 APOA4P06727 396 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 ARSAP15289 507 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 TPI1P60174 286 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 BNIP3Q12983 259 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 ITGADQ13349 1161 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 ARL13BQ3SXY8 428 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SMUG1Q53HV7 270 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 AARS2Q5JTZ9 985 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 GK5Q6ZS86 529 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 FRA10AC1Q70Z53 315 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 CATSPER4Q7RTX7 472 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 ZC3HC1Q86WB0 502 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SPNS2Q8IVW8 549 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SLC15A4Q8N697 577 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 PCDH20Q8N6Y1 951 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 WNT8BQ93098 351 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 GPR22Q99680 433 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms