RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 OGFOD2Q6N063 350 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TMEM53Q6P2H8 277 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 FAM47BQ8NA70 645 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ST13P5Q8NFI4 369 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 C18orf25Q96B23 403 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TAMM41Q96BW9 452 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 MAGED4Q96JG8 741 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 RHOBTB2Q9BYZ6 727 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CDH19Q9H159 772 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SUCOQ9UBS9 1254 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 AAR2Q9Y312 384 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 LACTBL1A8MY62 500 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SOCS7O14512 581 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ALOX5P09917 674 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 MAGP20916 626 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TNFSF9P41273 254 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ORC1Q13415 861 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 PCLAFQ15004 111 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 DALRD3Q5D0E6 543 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TRNP1Q6NT89 227 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CHSY3Q70JA7 882 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 MICALL2Q8IY33 904 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ROPN1LQ96C74 230 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ITPKCQ96DU7 683 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 FCRL5Q96RD9 977 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 STMN3Q9NZ72 180 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 KLHL20Q9Y2M5 609 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 AP3M1Q9Y2T2 418 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 UBA6A0AVT1 1052 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TARM1B6A8C7 271 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 DFFAO00273 331 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CD9P21926 228 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SOX10P56693 466 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 BRMS1LQ5PSV4 323 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 NBPF12Q5TAG4 269 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 LIPMQ5VYY2 423 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 KCTD11Q693B1 232 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 PMF1Q6P1K2 205 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 OR6P1Q8NGX9 317 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ASZ1Q8WWH4 475 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 PANX3Q96QZ0 392 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ENTPD7Q9NQZ7 604 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 IARS2Q9NSE4 1012 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 WDR27A2RRH5 827 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TRIM38O00635 465 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 DNAJA2O60884 412 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 VAPBO95292 243 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SEC24AO95486 1093 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 HOXC13P31276 330 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SULT1E1P49888 294 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 MTX3Q5HYI7 312 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 FAM183BPQ6ZVS7 135 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 MAGEE2Q8TD90 523 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 RPRD1BQ9NQG5 326 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 FAM49BQ9NUQ9 324 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SLC38A7Q9NVC3 462 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 DPP3Q9NY33 737 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 LMCD1Q9NZU5 365 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CROTQ9UKG9 612 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CARD8Q9Y2G2 431 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SLC45A1Q9Y2W3 748 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TCRBV7S3A2A0A539 114 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 PIRO00625 290 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 PCSK1P29120 753 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CXCR3P49682 368 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ZIK1Q3SY52 487 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 NADK2Q4G0N4 442 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 RALGPS1Q5JS13 557 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CHERPQ8IWX8 916 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 XPNPEP3Q9NQH7 507 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 RGPD3A6NKT7 1758 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 RGPD4Q7Z3J3 1758 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SUPT3HB4E1H0 165 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 H3BSA7 217 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SNPHO15079 494 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 BAIAP3O94812 1187 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CD48P09326 243 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TXNP10599 105 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 INSRRP14616 1297 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 GMPSP49915 693 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 TPTEP56180 551 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 GAD2Q05329 585 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 NOTUMQ6P988 496 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 MAMDC4Q6UXC1 1216 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF420Q8TAQ5 688 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SNX19Q92543 992 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 IL12RB2Q99665 862 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 GPATCH1Q9BRR8 931 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SLC2A11Q9BYW1 496 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 SNX15Q9NRS6 342 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
PTPRD-205ENST00000397611 EHD3Q9NZN3 535 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 CDH7Q9ULB5 785 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 AKT3Q9Y243 479 aa5.49□□□□□ -1.53
PTPRD-205ENST00000397611 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 POU4F1Q01851 419 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CHRNB3Q05901 458 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 BNIP2Q12982 314 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 FXNQ16595 210 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DUSP28Q4G0W2 176 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms