RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 IGLON5A6NGN9 336 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 ZNF487B1APH4 448 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 RNF103O00237 685 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 SOCS5O75159 536 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 MTA2O94776 668 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 DKK1O94907 266 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
SEC13-204ENST00000397099 ALPPL2P10696 532 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 CES1P23141 567 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 ABL2P42684 1182 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 ILKQ13418 452 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 ZNF235Q14590 738 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 AGERQ15109 404 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 UGP2Q16851 508 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 TMEM52BQ4KMG9 183 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 PRAMEF14Q5SWL7 426 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 TIGD7Q6NT04 549 aaPredicted RBP14.08□□□□□ -0.16
SEC13-204ENST00000397099 GCNT7Q6ZNI0 430 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 Q6ZSR6 202 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 NPWQ8N729 165 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 TSEN2Q8NCE0 465 aaKnown RBP14.08□□□□□ -0.16
SEC13-204ENST00000397099 BTN2A2Q8WVV5 523 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 FATE1Q969F0 183 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 CALN1Q9BXU9 219 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 TRIM5Q9C035 493 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 GPR27Q9NS67 375 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 AMACRQ9UHK6 382 aa14.08□□□□□ -0.16
SEC13-204ENST00000397099 DMXL2Q8TDJ6 3036 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 TMEM110-MUSTN1A8MSY1 372 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 H3BM21 787 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 LDOC1O95751 146 aaPredicted RBP14.07□□□□□ -0.16
SEC13-204ENST00000397099 KRT10P13645 584 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 TIMP2P16035 220 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 MX2P20592 715 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 AMPD1P23109 780 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 SLC1A1P43005 524 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 ADKP55263 362 aaKnown RBP14.07□□□□□ -0.16
SEC13-204ENST00000397099 TBX2Q13207 712 aaPredicted RBP14.07□□□□□ -0.16
SEC13-204ENST00000397099 TCEAL1Q15170 157 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 SHBQ15464 509 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 MARC1Q5VT66 337 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 PTAR1Q7Z6K3 402 aaPredicted RBP14.07□□□□□ -0.16
SEC13-204ENST00000397099 PARGQ86W56 976 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 PAF1Q8N7H5 531 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 OR13H1Q8NG92 308 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 ATL2Q8NHH9 583 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 KLK6Q92876 244 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 VOPP1Q96AW1 172 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 ECHDC3Q96DC8 303 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 BTBD6Q96KE9 485 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 EXOC2Q96KP1 924 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 CALR3Q96L12 384 aaKnown RBP14.07□□□□□ -0.16
SEC13-204ENST00000397099 BMFQ96LC9 184 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 KLF6Q99612 283 aaPredicted RBP14.07□□□□□ -0.16
SEC13-204ENST00000397099 DUSP23Q9BVJ7 150 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 USP29Q9HBJ7 922 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 NCKIPSDQ9NZQ3 722 aa14.07□□□□□ -0.16
SEC13-204ENST00000397099 ZZEF1O43149 2961 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 SHROOM3Q8TF72 1996 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 SPTY2D1-AS1A0A0U1RR47 76 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 SRRM3A6NNA2 597 aaPredicted RBP14.06□□□□□ -0.16
SEC13-204ENST00000397099 ENC1O14682 589 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 MAFKO60675 156 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 TCF4P15884 667 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 PEX5P50542 639 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 SCNN1BP51168 640 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 THOP1P52888 689 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 ZNF211Q13398 564 aaPredicted RBP14.06□□□□□ -0.16
SEC13-204ENST00000397099 DPYSL3Q14195 570 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 PAFAH1B3Q15102 231 aaKnown RBP14.06□□□□□ -0.16
SEC13-204ENST00000397099 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 LRRC38Q5VT99 294 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 CCNI2Q6ZMN8 369 aaPredicted RBP14.06□□□□□ -0.16
SEC13-204ENST00000397099 GATAD2AQ86YP4 633 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 CCDC170Q8IYT3 715 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 SLC35G2Q8TBE7 412 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 RFFLQ8WZ73 363 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 CENPTQ96BT3 561 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 CNDP2Q96KP4 475 aaKnown RBP14.06□□□□□ -0.16
SEC13-204ENST00000397099 TBATAQ96M53 351 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 NUDCD1Q96RS6 583 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 FZD3Q9NPG1 666 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 ATP8A1Q9Y2Q0 1164 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 CSNK1G3Q9Y6M4 447 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 CFAP47Q6ZTR5 3102 aa14.06□□□□□ -0.16
SEC13-204ENST00000397099 POM121BA6NF01 834 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 INSIG1O15503 277 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 BUB1BO60566 1050 aaPredicted RBP14.05□□□□□ -0.16
SEC13-204ENST00000397099 PIGNO95427 931 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 CSF2P04141 144 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 NME1P15531 152 aaKnown RBP14.05□□□□□ -0.16
SEC13-204ENST00000397099 ZFXP17010 805 aaPredicted RBP14.05□□□□□ -0.16
SEC13-204ENST00000397099 CA4P22748 312 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 IL4RP24394 825 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 MMP12P39900 470 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 MMP13P45452 471 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 BLKP51451 505 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 ARSEP51690 589 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 PFN3P60673 137 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms