RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 ZNF778Q96MU6 729 aa17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 PSKH2Q96QS6 385 aa17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 RANBP9Q96S59 729 aa17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 MGME1Q9BQP7 344 aa17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 IARS2Q9NSE4 1012 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 CFAP97Q9P2B7 532 aa17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 DOCK6Q96HP0 2047 aa17.32■□□□□ 0.36
SCNN1A-205ENST00000396966 TTC24A2A3L6 582 aaPredicted RBP17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 CCDC78A2IDD5 438 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 GJA1P17302 382 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 PTPN2P17706 415 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 GLDCP23378 1020 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 CPXM2Q8N436 756 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 AGAP2Q99490 1192 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 MAN1C1Q9NR34 630 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 ARMCX1Q9P291 453 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 MARCOQ9UEW3 520 aaPredicted RBP17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 LOC285095A0A1B0GVY8 99 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 MUSKO15146 869 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 WFS1O76024 890 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 CSE1LP55060 971 aaKnown RBP17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 CDH18Q13634 790 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 SLC14A2Q15849 920 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 TLDC1Q6P9B6 456 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 ALYREFQ86V81 257 aaKnown RBP17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 KCNV2Q8TDN2 545 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 PTCD3Q96EY7 689 aaKnown RBP17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 NSL1Q96IY1 281 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 FEM1CQ96JP0 617 aa17.31■□□□□ 0.36
SCNN1A-205ENST00000396966 CCDC22O60826 627 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 DNAJC6O75061 913 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ENTPD5O75356 428 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 EPOP01588 193 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 HLA-DPA1P20036 260 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 CES1P23141 567 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 DDX6P26196 483 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 CRHR1P34998 444 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 CDK18Q07002 472 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 SIRPB2Q5JXA9 342 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ATG16L1Q676U5 607 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ESRP1Q6NXG1 681 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ZCCHC23Q6ZST2 131 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ARID3BQ8IVW6 561 aaPredicted RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 DDI1Q8WTU0 396 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ATP2A3Q93084 1043 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 SLC46A2Q9BY10 475 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 CADM1Q9BY67 442 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 DENND2DQ9H6A0 471 aaPredicted RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 HCFC1R1Q9NWW0 138 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 SIRPGQ9P1W8 387 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 GFRA2O00451 464 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 TPP1O14773 563 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 TIMM44O43615 452 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 VAPBO95292 243 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 IL1BP01584 269 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ALDOAP04075 364 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 LIMK2P53671 638 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 IHHQ14623 411 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 GPR158Q5T848 1215 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 TRIM42Q8IWZ5 723 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 TDRD5Q8NAT2 981 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 GABPB2Q8TAK5 448 aaPredicted RBP17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 TTC8Q8TAM2 541 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 BTBD10Q9BSF8 475 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 C20orf27Q9GZN8 174 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 NMUR2Q9GZQ4 415 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 YY1AP1Q9H869 796 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 ACTL7AQ9Y615 435 aa17.3■□□□□ 0.36
SCNN1A-205ENST00000396966 LEFTY2O00292 366 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 FCHO1O14526 889 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 GRM6O15303 877 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 PEX11AO75192 247 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 FGF1P05230 155 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 EPHA5P54756 1037 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 LAMB3Q13751 1172 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 THOC5Q13769 683 aaKnown RBP17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 HSF5Q4G112 596 aaPredicted RBP17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 MPPE1Q53F39 396 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 KIAA0930Q6ICG6 404 aaPredicted RBP17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 C16orf46Q6P387 395 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 C7orf26Q96N11 449 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 NUDCD1Q96RS6 583 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 TLE6Q9H808 572 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 SCUBE2Q9NQ36 999 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 TREX1Q9NSU2 369 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 VPS28Q9UK41 221 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 H0Y3Z8 333 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 GOLGA8TH3BQL2 631 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 HNRNPCL1O60812 293 aaKnown RBP17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 RFPL2O75678 378 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 BPGMP07738 259 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 TYK2P29597 1187 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 HOXA9P31269 272 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 AVPR1AP37288 418 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 ARF5P84085 180 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 OCRLQ01968 901 aa17.29■□□□□ 0.36
SCNN1A-205ENST00000396966 CYTH1Q15438 398 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms