RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SEMA3CQ99985 751 aa15.74■□□□□ 0.11
GNE-202ENST00000396594 MYRFQ9Y2G1 1151 aa15.74■□□□□ 0.11
GNE-202ENST00000396594 COL2A1P02458 1487 aaPredicted RBP15.73■□□□□ 0.11
GNE-202ENST00000396594 SMIM31A0A1B0GVY4 71 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 RGSL1A5PLK6 1076 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 TLL1O43897 1013 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 USP2O75604 605 aaPredicted RBP15.73■□□□□ 0.11
GNE-202ENST00000396594 PIGNO95427 931 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 ITGAXP20702 1163 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 STAT5AP42229 794 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 LGALS3BPQ08380 585 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 TRAF2Q12933 501 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 IRGCQ6NXR0 463 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CHSY3Q70JA7 882 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 DHRSXQ8N5I4 330 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 ZNF514Q96K75 400 aaPredicted RBP15.73■□□□□ 0.11
GNE-202ENST00000396594 SQORQ9Y6N5 450 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 SMIM28A0A1B0GU29 152 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 A0A1B0GVM2 712 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 TCAF2A6NFQ2 919 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CLPTM1O96005 669 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 ACTR3P61158 418 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 PGLYRP2Q96PD5 576 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 PRDM12Q9H4Q4 367 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 MAGEL2Q9UJ55 1249 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 FSBPO95073 299 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 FGBP02675 491 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 PTX3P26022 381 aaPredicted RBP15.73■□□□□ 0.11
GNE-202ENST00000396594 PBX3P40426 434 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CCNFP41002 786 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 PRKG2Q13237 762 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CCDC142Q17RM4 750 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 TEX44Q53QW1 395 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 MTX3Q5HYI7 312 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 ZNF605Q86T29 641 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 NTAN1Q96AB6 310 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 SLC38A2Q96QD8 506 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CHST7Q9NS84 486 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 SMPD4Q9NXE4 827 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 GSTK1Q9Y2Q3 226 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 MEI4A8MW99 385 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 KCNK1O00180 336 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 MED26O95402 600 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CXCL14O95715 111 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 ZNF33AQ06730 810 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 TAB1Q15750 504 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 CAPN13Q6MZZ7 669 aaPredicted RBP15.73■□□□□ 0.11
GNE-202ENST00000396594 RIPOR1Q6ZS17 1223 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 IKBIPQ70UQ0 350 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 WDR60Q8WVS4 1066 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 RASSF5Q8WWW0 418 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 DEPDC7Q96QD5 511 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 PDZD7Q9H5P4 517 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 DIABLOQ9NR28 239 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 COLEC10Q9Y6Z7 277 aa15.73■□□□□ 0.11
GNE-202ENST00000396594 FAM20BO75063 409 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 SSTR1P30872 391 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 CCDC85BQ15834 202 aaPredicted RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 RAET1GQ6H3X3 334 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 SPPL2AQ8TCT8 520 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 CATSPER2Q96P56 530 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 GBA3Q9H227 469 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 SPAG4Q9NPE6 437 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 C3orf18Q9UK00 162 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 HIST1H2ABP04908 130 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 FLT3LGP49771 235 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 IL10RBQ08334 325 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 HIST3H2AQ7L7L0 130 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 HIST1H2ACQ93077 130 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 RNF145Q96MT1 663 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 GAS2L1Q99501 681 aaPredicted RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 CORO1BQ9BR76 489 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 SLC25A51Q9H1U9 297 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 FBXO5Q9UKT4 447 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 BTBD19C9JJ37 291 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 TSPAN1O60635 241 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 UBOX5O94941 541 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 HGFP14210 728 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 TPP2P29144 1249 aaPredicted RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 HNRNPH1P31943 449 aaKnown RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 HCAR3P49019 387 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 ATP13A5Q4VNC0 1218 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 TDRPQ86YL5 185 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 NIPA2Q8N8Q9 360 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 OR52K1Q8NGK4 314 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 TTLL2Q9BWV7 592 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 BBS2Q9BXC9 721 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 HHATLQ9HCP6 504 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 AFDNP55196 1824 aaKnown RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 LTN1O94822 1766 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 ATG13O75143 517 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 ECDO95905 644 aaPredicted RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 CCDC159P0C7I6 412 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 AMD1P17707 334 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 DGUOKQ16854 277 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 TTC27Q6P3X3 843 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 AIF1LQ9BQI0 150 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 POLR1BQ9H9Y6 1135 aa15.72■□□□□ 0.11
GNE-202ENST00000396594 TDRKHQ9Y2W6 561 aaKnown RBP15.72■□□□□ 0.11
GNE-202ENST00000396594 MYL12BO14950 172 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms