RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 OR10T2Q8NGX3 314 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 RBM22Q9NW64 420 aaKnown RBP eCLIP9.37□□□□□ -0.912e-6■■■□□ 16.2
NDE1-201ENST00000396354 THEGQ9P2T0 379 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 KCTD3Q9Y597 815 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 E7ENX8 843 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 MAGEB3O15480 346 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 GALR2O43603 387 aaPredicted RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 RNASEH2AO75792 299 aaKnown RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PRSS56P0CW18 603 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 CCDC166P0CW27 439 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 STMN1P16949 149 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 NOS2P35228 1153 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 SLC1A2P43004 574 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 FAM83EQ2M2I3 478 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 STRADAQ7RTN6 431 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 CNTD1Q8N815 330 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 HEXDCQ8WVB3 486 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 BHMTQ93088 406 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 COLEC11Q9BWP8 271 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 TRMT13Q9NUP7 481 aaKnown RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 UTP6Q9NYH9 597 aaKnown RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 MYLKQ15746 1914 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 A0A0C4DFX4 3053 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 NR5A2O00482 541 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 DCLK1O15075 740 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 STAMBPO95630 424 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 AP2A1O95782 977 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 SLC35E2BP0CK96 405 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 THRAP10827 490 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 AKR1A1P14550 325 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PCSK6P29122 969 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PNPLA4P41247 253 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 GRIA3P42263 894 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 GALK1P51570 392 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 MTTPP55157 894 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 DAOAP59103 153 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 USP46P62068 366 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 ECT2LQ008S8 904 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PRKCZQ05513 592 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PCBP1Q15365 356 aaKnown RBP eCLIP9.37□□□□□ -0.918e-6■□□□□ 10.9
NDE1-201ENST00000396354 UPP1Q16831 310 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 LRRC23Q53EV4 343 aaPredicted RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 SERINC5Q86VE9 423 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 LCA5Q86VQ0 697 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 MFSD6LQ8IWD5 586 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 TXNDC5Q8NBS9 432 aaKnown RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 EXOC2Q96KP1 924 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 KCNA7Q96RP8 456 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 NT5MQ9NPB1 228 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 RPL26L1Q9UNX3 145 aaKnown RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 TRPV2Q9Y5S1 764 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 UBA6A0AVT1 1052 aaPredicted RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 RGSL1A5PLK6 1076 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 ERI2A8K979 691 aaKnown RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 DUSP11O75319 330 aaKnown RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 SOAT2O75908 522 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 ELNP15502 786 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 CDC42EP1Q00587 391 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 NSUN2Q08J23 767 aaKnown RBP eCLIP9.36□□□□□ -0.91
NDE1-201ENST00000396354 SEMA3BQ13214 749 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 ANO4Q32M45 955 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 SPANXN3Q5MJ09 141 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 PDCD6IPQ8WUM4 868 aaKnown RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 NUDT8Q8WV74 236 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 SMIM14Q96QK8 99 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 NR1H4Q96RI1 486 aaPredicted RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 SERPINI1Q99574 410 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 CCT7Q99832 543 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 TMEM79Q9BSE2 394 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 SARS2Q9NP81 518 aaKnown RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 OXSMQ9NWU1 459 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 ARHGEF38Q9NXL2 777 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 EVLQ9UI08 416 aaPredicted RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 PADI3Q9ULW8 664 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 NEU3Q9UQ49 428 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 COMMD10Q9Y6G5 202 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 THSD7BQ9C0I4 1608 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 GRID2O43424 1007 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 CCNT2O60583 730 aaKnown RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 ME2P23368 584 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 CNTFP26441 200 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 SCNN1AP37088 669 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 PPARGP37231 505 aaPredicted RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 FLT3LGP49771 235 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 TBCCQ15814 346 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 DBN1Q16643 649 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 ARL13BQ3SXY8 428 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 CCDC153Q494R4 210 aa9.36□□□□□ -0.91
NDE1-201ENST00000396354 ZC3HC1Q86WB0 502 aaKnown RBP9.36□□□□□ -0.91
NDE1-201ENST00000396354 OFCC1Q8IZS5 231 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms