RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 UGP2Q16851 508 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 LRRC73Q5JTD7 316 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 SYCP2LQ5T4T6 812 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 KIAA0895LQ68EN5 471 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 PID1Q7Z2X4 250 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 ZSWIM9Q86XI8 627 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 RASGEF1CQ8N431 466 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 COG1Q8WTW3 980 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 IMP4Q96G21 291 aaKnown RBP19.36■□□□□ 0.69
HOXA9-202ENST00000396345 MS4A14Q96JA4 679 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 USP29Q9HBJ7 922 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 ZKSCAN5Q9Y2L8 839 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 FADS3Q9Y5Q0 445 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 DMDP11532 3685 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 A0A1W2PQ67 120 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 CTAGE9A4FU28 777 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 NEMP1O14524 444 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 PCDH8O95206 1070 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 EPN2O95208 641 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 MMP2P08253 660 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 NFKB1P19838 968 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 CA4P22748 312 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 CD68P34810 354 aaPredicted RBP19.35■□□□□ 0.69
HOXA9-202ENST00000396345 CCR5P51681 352 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 WDR45BQ5MNZ6 344 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 ARMC12Q5T9G4 340 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 NEK5Q6P3R8 708 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 CYP2U1Q7Z449 544 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 PRPF39Q86UA1 669 aaKnown RBP19.35■□□□□ 0.69
HOXA9-202ENST00000396345 FAM71DQ8N9W8 422 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 SNX19Q92543 992 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 RBM15Q96T37 977 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOXA9-202ENST00000396345 GMEB2Q9UKD1 530 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 TTC7AQ9ULT0 858 aaPredicted RBP19.35■□□□□ 0.69
HOXA9-202ENST00000396345 PCDHB9Q9Y5E1 797 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 GPR179Q6PRD1 2367 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 GON4LQ3T8J9 2241 aa19.35■□□□□ 0.69
HOXA9-202ENST00000396345 ZFHX2Q9C0A1 2572 aaPredicted RBP19.35■□□□□ 0.69
HOXA9-202ENST00000396345 CFAP69A5D8W1 941 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 CES2O00748 559 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 AREL1O15033 823 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 TSPAN6O43657 245 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 RNGTTO60942 597 aaKnown RBP19.34■□□□□ 0.69
HOXA9-202ENST00000396345 PGLSO95336 258 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 CPP00450 1065 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 IGHV4-34P06331 123 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 RETP07949 1114 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 TCP1P17987 556 aaKnown RBP19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ITIH2P19823 946 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ITPKAP23677 461 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 PPP2CBP62714 309 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 PPP2CAP67775 309 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 CREB5Q02930 508 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ELP6Q0PNE2 266 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 SNX1Q13596 522 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 CCNG2Q16589 344 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ANKRD20A2Q5SQ80 823 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ANKRD20A1Q5TYW2 823 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ANKRD20A3Q5VUR7 823 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 PAPD7Q5XG87 772 aaKnown RBP19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ITPRIPL1Q6GPH6 555 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ERAP2Q6P179 960 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 TRIM69Q86WT6 500 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 RGL4Q8IZJ4 473 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 SPOCK2Q92563 424 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 BIRC7Q96CA5 298 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 FEM1CQ96JP0 617 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
HOXA9-202ENST00000396345 TMEM121Q9BTD3 319 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 PCDH12Q9NPG4 1184 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 RSPH14Q9UHP6 348 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 GGT7Q9UJ14 662 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ZNF148Q9UQR1 794 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ITM2BQ9Y287 266 aa19.34■□□□□ 0.69
HOXA9-202ENST00000396345 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.34■□□□□ 0.69
HOXA9-202ENST00000396345 MYO15AQ9UKN7 3530 aa19.33■□□□□ 0.69
HOXA9-202ENST00000396345 TNRC6BQ9UPQ9 1833 aaKnown RBP19.33■□□□□ 0.69
HOXA9-202ENST00000396345 A0A1W2PQU0 124 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 C5orf60A6NFR6 353 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 C10orf142B7Z368 130 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PGRMC1O00264 195 aaKnown RBP19.33■□□□□ 0.68
HOXA9-202ENST00000396345 RIOK3O14730 519 aaKnown RBP19.33■□□□□ 0.68
HOXA9-202ENST00000396345 SPINT1O43278 529 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 FZD6O60353 706 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PRKCGP05129 697 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PRLRP16471 622 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 MAOBP27338 520 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 OASLQ15646 514 aaKnown RBP19.33■□□□□ 0.68
HOXA9-202ENST00000396345 SLC14A2Q15849 920 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 HORMAD1Q86X24 394 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 SPATA22Q8NHS9 363 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 ACTRT1Q8TDG2 376 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PIGKQ92643 395 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 SPATA13Q96N96 652 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 FCRL5Q96RD9 977 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 TDRD1Q9BXT4 1180 aaKnown RBP19.33■□□□□ 0.68
HOXA9-202ENST00000396345 ARRDC1-AS1Q9H2J1 176 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PCDH9Q9HC56 1237 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 HOMER3Q9NSC5 361 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms