RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SIM2Q14190 667 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 TRIP13Q15645 432 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 TBCCQ15814 346 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TEX44Q53QW1 395 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 C1orf146Q5VVC0 180 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 SYPL2Q5VXT5 272 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 LPCAT4Q643R3 524 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 PDE12Q6L8Q7 609 aaKnown RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 METTL3Q86U44 580 aaKnown RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 TAC4Q86UU9 113 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 RFX6Q8HWS3 928 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 AHI1Q8N157 1196 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CACTIN-AS1Q8N1I8 211 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 RDH11Q8TC12 318 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CLEC4CQ8WTT0 213 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 BIRC8Q96P09 236 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CYP2S1Q96SQ9 504 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 FAM83CQ9BQN1 747 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TMEM121Q9BTD3 319 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 LRRC3Q9BY71 257 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 ACE2Q9BYF1 805 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 LRRC40Q9H9A6 602 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TREX1Q9NSU2 369 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TMEM45AQ9NWC5 275 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TAGLN3Q9UI15 199 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 PADI4Q9UM07 663 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 SOX13Q9UN79 622 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CEPT1Q9Y6K0 416 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 MTMR11A4FU01 709 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 MROH6A6NGR9 719 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TXNDC9O14530 226 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CBFA2T3O75081 653 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 H2AFYO75367 372 aaKnown RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 TIMP1P01033 207 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 LCP1P13796 627 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 LAG3P18627 525 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CDH2P19022 906 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 PEX2P28328 305 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 SERPINB5P36952 375 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 NUMBP49757 651 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 SLC5A3P53794 718 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 IL10RBQ08334 325 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 KRT81Q14533 505 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TLR1Q15399 786 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 MSS51Q4VC12 460 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 OGFRL1Q5TC84 451 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 ANKRD22Q5VYY1 191 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 GRAMD4Q6IC98 578 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TMEM53Q6P2H8 277 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 FBXO46Q6PJ61 603 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 SETD3Q86TU7 594 aaPredicted RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 ZBTB46Q86UZ6 589 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 ERI1Q8IV48 349 aaKnown RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 SIX5Q8N196 739 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 VPS37AQ8NEZ2 397 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 TCP10LQ8TDR4 215 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 HCAR2Q8TDS4 363 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 GDPD5Q8WTR4 605 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 RSAD2Q8WXG1 361 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 CCT7Q99832 543 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 VN1R3Q9BXE9 311 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 IL22Q9GZX6 179 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 MUC3BQ9H195 1237 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 NOL6Q9H6R4 1146 aaKnown RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 KCNK4Q9NYG8 393 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 SIRPGQ9P1W8 387 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 ARMCX1Q9P291 453 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 AAR2Q9Y312 384 aaKnown RBP5.42□□□□□ -1.54
VPS41-203ENST00000395969 PCDHB7Q9Y5E2 793 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 HEY1Q9Y5J3 304 aa5.42□□□□□ -1.54
VPS41-203ENST00000395969 WDR91A4D1P6 747 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 POC1B-GALNT4F8VUJ3 575 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 MFSD11O43934 449 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 SNNO75324 88 aaPredicted RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 PDE5AO76074 875 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 MYL2P10916 166 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 HMGA1P17096 107 aaKnown RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 CD68P34810 354 aaPredicted RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 PPM1AP35813 382 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 HALP42357 657 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 CPA2P48052 419 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 PTPN5P54829 565 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 RELAQ04206 551 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 ZBTB16Q05516 673 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 GALNT1Q10472 559 aaPredicted RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 CCNIQ14094 377 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 PGM2L1Q6PCE3 622 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 LILRA6Q6PI73 481 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 KCNT2Q6UVM3 1135 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 KDELC1Q6UW63 502 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 PACS1Q6VY07 963 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 PATL1Q86TB9 770 aaKnown RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 ALYREFQ86V81 257 aaKnown RBP5.41□□□□□ -1.54
VPS41-203ENST00000395969 LEMD2Q8NC56 503 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 GRIN3AQ8TCU5 1115 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 JADE3Q92613 823 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 ELMO3Q96BJ8 720 aa5.41□□□□□ -1.54
VPS41-203ENST00000395969 ITPKCQ96DU7 683 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms