RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.531e-7■□□□□ 9.2
VPS13C-204ENST00000395898 CCNDBP1O95273 360 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GRIA3P42263 894 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 C21orf59P57076 290 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MRPS5P82675 430 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PTSQ03393 145 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TAF13Q15543 124 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ANXA8L1Q5VT79 327 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CRELD2Q6UXH1 353 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TMC5Q6UXY8 1006 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RINLQ6ZS11 566 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 C16orf59Q7L2K0 433 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 OR4L1Q8NH43 312 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 WDR18Q9BV38 432 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SNRNP25Q9BV90 132 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 UNKQ9C0B0 810 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NUDT5Q9UKK9 219 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ERGIC3Q9Y282 383 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RIC1Q4ADV7 1423 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MGRN1O60291 552 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 USP12O75317 370 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SERPINB7O75635 380 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TFEBP19484 476 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NDUFA5Q16718 116 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PARP15Q460N3 678 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RAP1GAP2Q684P5 730 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MZT2BQ6NZ67 158 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SERPINA13PQ6UXR4 307 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CYP2R1Q6VVX0 501 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SNX32Q86XE0 403 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MAGEE2Q8TD90 523 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TEFMQ96QE5 360 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 FAM105AQ9NUU6 356 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 KIAA1522Q9P206 1035 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 UBIAD1Q9Y5Z9 338 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ASTN1O14525 1302 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 KNDC1Q76NI1 1749 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 A0A087X0B3 334 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ANKRD63C9JTQ0 380 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 H3BNH8 94 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TBL1XO60907 577 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CDC25CP30307 473 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CDC42P60953 191 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GPAT3Q53EU6 434 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NOL9Q5SY16 702 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GJC2Q5T442 439 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 APTXQ7Z2E3 356 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TOP6BLQ8N6T0 577 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 C5orf60A6NFR6 353 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 G3V2T6 193 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SNX3O60493 162 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SMIM10L2AP0DMW4 78 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SMIM10L2BP0DMW5 78 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 HGFP14210 728 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GOT1P17174 413 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CDH5P33151 784 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CCR4P51679 360 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MRPS22P82650 360 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 B3GNT6Q6ZMB0 384 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GPRIN3Q6ZVF9 776 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 DET1Q7L5Y6 550 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF671Q8TAW3 534 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MPP4Q96JB8 637 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SPACA7Q96KW9 195 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SLC9A8Q9Y2E8 581 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RFXANKO14593 260 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NUDT17P0C025 328 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 S100GP29377 79 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PSMD4P55036 377 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MAP2K5Q13163 448 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NEDD8Q15843 81 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 XKR6Q5GH73 641 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TCAIMQ8N3R3 496 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ASZ1Q8WWH4 475 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PIK3R5Q8WYR1 880 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NELL1Q92832 810 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RNPEPL1Q9HAU8 725 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RHBDL2Q9NX52 303 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF624Q9P2J8 865 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RCOR3Q9P2K3 495 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CRNNQ9UBG3 495 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MRTO4Q9UKD2 239 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PRPF19Q9UMS4 504 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PCDHB1Q9Y5F3 818 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ADM5C9JUS6 153 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 FSBPO95073 299 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ELFN1P0C7U0 828 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MYBL2P10244 700 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TRIM25Q14258 630 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 BMT2Q1RMZ1 405 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RFTN2Q52LD8 501 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 C9orf57Q5W0N0 161 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TAPT1Q6NXT6 567 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GPR180Q86V85 440 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 KLHL23Q8NBE8 558 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CXorf40BQ96DE9 158 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 BTN2A3PQ96KV6 586 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MFSD14AQ96MC6 490 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CORO1BQ9BR76 489 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 KIFC1Q9BW19 673 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms